RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 PLEKHA3Q9HB20 300 aa16.55■□□□□ 0.24
DDX55-205ENST00000538744 KIAA1456Q9P272 454 aa16.55■□□□□ 0.24
DDX55-205ENST00000538744 AMMECR1Q9Y4X0 333 aaPredicted RBP16.55■□□□□ 0.24
DDX55-205ENST00000538744 TRAV1-1A0A0B4J248 108 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 MYOD1P15172 320 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 USF1P22415 310 aaPredicted RBP16.54■□□□□ 0.24
DDX55-205ENST00000538744 NPY1RP25929 384 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 CD1BP29016 333 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 CCL20P78556 96 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 SP5Q6BEB4 398 aaPredicted RBP16.54■□□□□ 0.24
DDX55-205ENST00000538744 ATRAIDQ6UW56 229 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 ZNF709Q8N972 641 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 OR5B3Q8NH48 314 aa16.54■□□□□ 0.24
DDX55-205ENST00000538744 TEX50A0A1B0GTY4 177 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 PRSS46E5RG02 174 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 IFNA4P05014 189 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 EFNA4P52798 201 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 ELLP55199 621 aaPredicted RBP16.53■□□□□ 0.24
DDX55-205ENST00000538744 DLX1P56177 255 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 DLK1P80370 383 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 GUCA2BQ16661 112 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 TMEM170AQ8WVE7 144 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 NPCDR1Q9BY65 106 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 NKX6-2Q9C056 277 aaPredicted RBP16.53■□□□□ 0.24
DDX55-205ENST00000538744 LRBAP50851 2863 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 LOC105371242A0A075B767 164 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 C17orf112F2Z3M2 114 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 BUB1B-PAK6H3BSN5 160 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 COX7A1P24310 79 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 BTN1A1Q13410 526 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 TMEM167AQ8TBQ9 72 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 SMDT1Q9H4I9 107 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 WDR83OSQ9Y284 106 aa16.53■□□□□ 0.24
DDX55-205ENST00000538744 RBFOX3A6NFN3 312 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 GOSR1O95249 250 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 MBP02144 154 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 PPT1P50897 306 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 RPL8P62917 257 aaKnown RBP16.52■□□□□ 0.24
DDX55-205ENST00000538744 SUN5Q8TC36 379 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 MBD3L1Q8WWY6 194 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 RCC1LQ96I51 464 aaKnown RBP16.52■□□□□ 0.24
DDX55-205ENST00000538744 COMMD5Q9GZQ3 224 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 KPTNQ9Y664 436 aa16.52■□□□□ 0.24
DDX55-205ENST00000538744 ACACBO00763 2458 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 M0R1W7 72 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 NDUFS7O75251 213 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 MPDU1O75352 247 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 CA2P00918 260 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 IGLV2-23P01705 113 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 HNF4GQ14541 408 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 ZNF726P1Q15940 193 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 VMA21Q3ZAQ7 101 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 ACSM6Q6P461 480 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 PNKDQ8N490 385 aa16.51■□□□□ 0.23
DDX55-205ENST00000538744 SMCO3A2RU48 225 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 SNAPINO95295 136 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 OPN1MWP04001 364 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 OPN1MW2P0DN77 364 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 OPN1MW3P0DN78 364 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 LGALS7P47929 136 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 ATP5IP56385 69 aaPredicted RBP16.5■□□□□ 0.23
DDX55-205ENST00000538744 PRB3Q04118 309 aaPredicted RBP16.5■□□□□ 0.23
DDX55-205ENST00000538744 FFAR4Q5NUL3 377 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 Q8N7P7 452 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.5■□□□□ 0.23
DDX55-205ENST00000538744 OR4P4Q8NGL7 312 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 OR1L8Q8NGR8 309 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 INSIG2Q9Y5U4 225 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 IGHV1-3A0A0C4DH29 117 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 ENSAO43768 121 aaKnown RBP16.5■□□□□ 0.23
DDX55-205ENST00000538744 ZNF787Q6DD87 383 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 IGSF10Q6WRI0 2623 aa16.5■□□□□ 0.23
DDX55-205ENST00000538744 SOX15O60248 233 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 ARF6P62330 175 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 LCN15Q6UWW0 184 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 RPEQ96AT9 228 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 RARRES2Q99969 163 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 SLC35B3Q9H1N7 401 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 NDUFA4L2Q9NRX3 87 aa16.49■□□□□ 0.23
DDX55-205ENST00000538744 TMA7Q9Y2S6 64 aaKnown RBP16.49■□□□□ 0.23
DDX55-205ENST00000538744 IGHV3-72A0A0B4J1Y9 119 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 TREML4Q6UXN2 200 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 SSX7Q7RTT5 188 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 MOB3BQ86TA1 216 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 RPP25LQ8N5L8 163 aaKnown RBP16.48■□□□□ 0.23
DDX55-205ENST00000538744 CLDND2Q8NHS1 167 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 MAP1LC3B2A6NCE7 125 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 IGKV1D-33P01593 117 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 IGKV1-33P01594 117 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 HAGHQ16775 308 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 ZNF506Q5JVG8 444 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 OR11H6Q8NGC7 330 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 OR10G4Q8NGN3 311 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 OR10G9Q8NGN4 311 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 OR10G7Q8NGN6 311 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 MAP1LC3BQ9GZQ8 125 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 NPVFQ9HCQ7 196 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 SLC39A9Q9NUM3 307 aa16.48■□□□□ 0.23
DDX55-205ENST00000538744 A0A1W2PN81 502 aa16.47■□□□□ 0.23
DDX55-205ENST00000538744 FNDC10F2Z333 226 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms