RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 INO80EQ8NBZ0 244 aaPredicted RBP13.76□□□□□ -0.21
CLN6-202ENST00000538696 OR5R1Q8NH85 324 aa13.76□□□□□ -0.21
CLN6-202ENST00000538696 RHOVQ96L33 236 aa13.76□□□□□ -0.21
CLN6-202ENST00000538696 AQP10Q96PS8 301 aa13.76□□□□□ -0.21
CLN6-202ENST00000538696 DUX5Q96PT3 197 aa13.76□□□□□ -0.21
CLN6-202ENST00000538696 ARL6Q9H0F7 186 aa13.76□□□□□ -0.21
CLN6-202ENST00000538696 TNFRSF19Q9NS68 423 aa13.76□□□□□ -0.21
CLN6-202ENST00000538696 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
CLN6-202ENST00000538696 A0A0D9SG52 128 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 A6NDX4 124 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 WRBO00258 174 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 SHOXO15266 292 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 SNAPC5O75971 98 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 HRASP01112 189 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 NUP62P37198 522 aaPredicted RBP13.75□□□□□ -0.21
CLN6-202ENST00000538696 EBI3Q14213 229 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 OR4A47Q6IF82 309 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
CLN6-202ENST00000538696 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
CLN6-202ENST00000538696 BTBD17A6NE02 478 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 FAM90A26D6RGX4 464 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 CHST1O43916 411 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 TMEM50AO95807 157 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 IAPPP10997 89 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 TMEM11P17152 192 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 MC5RP33032 325 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 P2RY1P47900 373 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 PAX9P55771 341 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 VAMP2P63027 116 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 RELBQ01201 579 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 HES1Q14469 280 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 TMEM219Q86XT9 240 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 Q8N6K4 173 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 OR2T10Q8NGZ9 312 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 OSR1Q8TAX0 266 aaPredicted RBP13.74□□□□□ -0.21
CLN6-202ENST00000538696 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
CLN6-202ENST00000538696 EAF1Q96JC9 268 aaPredicted RBP13.74□□□□□ -0.21
CLN6-202ENST00000538696 RBKSQ9H477 322 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 SLA2Q9H6Q3 261 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 HSPB7Q9UBY9 170 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 VPREB3Q9UKI3 123 aa13.74□□□□□ -0.21
CLN6-202ENST00000538696 FAM24AA6NFZ4 105 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 BCL2L11O43521 198 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 SYNGR2O43760 224 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 RBMXL2O75526 392 aaKnown RBP13.73□□□□□ -0.21
CLN6-202ENST00000538696 MOSP00540 346 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 FAM106CPP0CH98 169 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 SAA1P0DJI8 122 aaPredicted RBP13.73□□□□□ -0.21
CLN6-202ENST00000538696 PVALBP20472 110 aaPredicted RBP13.73□□□□□ -0.21
CLN6-202ENST00000538696 C4BPBP20851 252 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 RPL12P30050 165 aaKnown RBP13.73□□□□□ -0.21
CLN6-202ENST00000538696 TNFRSF9Q07011 255 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 AARDQ4LEZ3 155 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 OR4A16Q8NH70 328 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 BSCL2Q96G97 398 aaPredicted RBP13.73□□□□□ -0.21
CLN6-202ENST00000538696 RITA1Q96K30 269 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 GON7Q9BXV9 100 aa13.73□□□□□ -0.21
CLN6-202ENST00000538696 CUBNO60494 3623 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 KANTRA0A1W2PQU2 76 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 IGSF23A1L1A6 192 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 CLDN34H7C241 214 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 UPK2O00526 184 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 TCF21O43680 179 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 GPR137BO60478 399 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 IGLV2-23P01705 113 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 IL6RP08887 468 aaPredicted RBP13.72□□□□□ -0.21
CLN6-202ENST00000538696 RPS16P62249 146 aaKnown RBP13.72□□□□□ -0.21
CLN6-202ENST00000538696 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
CLN6-202ENST00000538696 HNF4GQ14541 408 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 SPINK9Q5DT21 86 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 PUSL1Q8N0Z8 303 aaKnown RBP13.72□□□□□ -0.21
CLN6-202ENST00000538696 ZC4H2Q9NQZ6 224 aa13.72□□□□□ -0.21
CLN6-202ENST00000538696 C15orf61A6NNL5 157 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 MYOD1P15172 320 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 CNTFRP26992 372 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 OR2C3Q8N628 320 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 OR4C13Q8NGP0 309 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 RBM14Q96PK6 669 aaKnown RBP13.71□□□□□ -0.21
CLN6-202ENST00000538696 JMJD8Q96S16 334 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 RAB40CQ96S21 281 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 ARPC5LQ9BPX5 153 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 SLC25A33Q9BSK2 321 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 BET1LQ9NYM9 111 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 PITPNC1Q9UKF7 332 aa13.71□□□□□ -0.21
CLN6-202ENST00000538696 H3BP45 60 aa13.7□□□□□ -0.22
CLN6-202ENST00000538696 RGS13O14921 159 aa13.7□□□□□ -0.22
CLN6-202ENST00000538696 MED6O75586 246 aa13.7□□□□□ -0.22
CLN6-202ENST00000538696 CAV2P51636 162 aa13.7□□□□□ -0.22
CLN6-202ENST00000538696 UBE2KP61086 200 aa13.7□□□□□ -0.22
CLN6-202ENST00000538696 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
CLN6-202ENST00000538696 EWSR1Q01844 656 aaKnown RBP eCLIP13.7□□□□□ -0.227e-6■■□□□ 12.2
CLN6-202ENST00000538696 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
CLN6-202ENST00000538696 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
CLN6-202ENST00000538696 CEBPZOSA8MTT3 80 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 KBTBD11O94819 623 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 CFDP00746 253 aaPredicted RBP13.69□□□□□ -0.22
CLN6-202ENST00000538696 RNASE1P07998 156 aaKnown RBP13.69□□□□□ -0.22
CLN6-202ENST00000538696 F2RL1P55085 397 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 RPL23AP62750 156 aaKnown RBP13.69□□□□□ -0.22
CLN6-202ENST00000538696 C16orf82Q7Z2V1 217 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms