RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ZNF562Q6V9R5 426 aa7.12□□□□□ -1.27
SRGAP1-202ENST00000537556 Q6ZSR3 168 aa7.12□□□□□ -1.27
SRGAP1-202ENST00000537556 OR10X1Q8NGY0 326 aa7.12□□□□□ -1.27
SRGAP1-202ENST00000537556 TRIB1Q96RU8 372 aa7.12□□□□□ -1.27
SRGAP1-202ENST00000537556 RNASE7Q9H1E1 156 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-202ENST00000537556 MYOFQ9NZM1 2061 aa7.12□□□□□ -1.27
SRGAP1-202ENST00000537556 IGHV1-24A0A0C4DH33 117 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 VWC2LB2RUY7 222 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 NKX2-8O15522 239 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 SYNGR1O43759 233 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 MPDU1O75352 247 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 IGKV1-5P01602 117 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 ZNF718Q3SXZ3 478 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 LYSMD4Q5XG99 296 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 SSX8Q7RTT4 187 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 BOD1L2Q8IYS8 172 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 EMC6Q9BV81 110 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 YAE1D1Q9NRH1 226 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 IGHV3-7P01780 117 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 SCTP09683 121 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 CT45A6P0DMU7 189 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 CT45A5P0DMU8 189 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 CT45A7P0DMV0 189 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 AREGP15514 252 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 KIR2DL2P43627 348 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 MFAP2P55001 183 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 ATP5G2Q06055 141 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 CT45A1Q5HYN5 189 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 LINC01545Q5VT33 79 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 Q6ZPA2 131 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 PRR22Q8IZ63 422 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 CT45A3Q8NHU0 189 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 PRTFDC1Q9NRG1 225 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 LIN7CQ9NUP9 197 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 OR1A1Q9P1Q5 309 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 HCSTQ9UBK5 93 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 ADAMTS9Q9P2N4 1935 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 A0A1W2PQD3 144 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 PRR33A8MZF0 331 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 E9PLN8 166 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 TNFRSF13BO14836 293 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 RBM11P57052 281 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 IGLV3-21P80748 117 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 WFDC2Q14508 124 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 PQLC2Q6ZP29 291 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 LCNL1Q6ZST4 164 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 TCEAL8Q8IYN2 117 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 LRRC29Q8WV35 223 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 NANOS1Q8WY41 292 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 ADTRPQ96IZ2 230 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 NDFIP1Q9BT67 221 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 YTHDF2Q9Y5A9 579 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-202ENST00000537556 SCN10AQ9Y5Y9 1956 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 A0A1W2PRE2 83 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 IGKV1-39P01597 117 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 IGKV1D-39P04432 117 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 CISD3P0C7P0 127 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 IL11P20809 199 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 EDDM3BP56851 147 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 KLRD1Q13241 179 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 LY6G5CQ5SRR4 150 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 OOSP2Q86WS3 158 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 CITED1Q99966 193 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 RNF208Q9H0X6 261 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 SH2D2AQ9NP31 389 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 SPAG17Q6Q759 2223 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 PMS2P5A8MQ11 134 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 PRKNO60260 465 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 CER1O95813 267 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 CDAP32320 146 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 TAS2R45P59539 299 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 PDCD1Q15116 288 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 PDLIM3Q53GG5 364 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 MYO7BQ6PIF6 2116 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 SPEM1Q8N4L4 309 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 STPG3Q8N7X2 389 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 ELSPBP1Q96BH3 223 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 NXF5Q9H1B4 397 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 TMEM140Q9NV12 185 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 WDR83OSQ9Y284 106 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 ATP23Q9Y6H3 246 aa7.1□□□□□ -1.27
SRGAP1-202ENST00000537556 TEX50A0A1B0GTY4 177 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 A0A1W2PRD5 423 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 A0A1W2PRF3 423 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 A0A1W2PRM7 423 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A10PA6NDY2 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A18PA6NE21 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A16PA6NEW6 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A20PA6NIJ5 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A8PA6NJQ4 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A7PA6NKC0 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A22PA8MWA6 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A12PA8MX19 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A5PA8MXJ8 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A23PA8MXZ1 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 TGFBR3LH3BV60 316 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A15PP0C7V4 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A13PP0C7W8 464 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms