RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 FBXW9Q5XUX1 488 aa10.08□□□□□ -0.8
POLR1B-216ENST00000537335 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
POLR1B-216ENST00000537335 SF3B5Q9BWJ5 86 aaKnown RBP10.08□□□□□ -0.8
POLR1B-216ENST00000537335 C3AR1Q16581 482 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 WIPI1Q5MNZ9 446 aaPredicted RBP10.07□□□□□ -0.8
POLR1B-216ENST00000537335 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 SYS1-DBNDD2H3BUS1 97 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 RAMP3O60896 148 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 GFERP55789 205 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 ZP4Q12836 540 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 F8W1H4 67 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 K7EP34 96 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 RNPS1Q15287 305 aaKnown RBP10.07□□□□□ -0.8
POLR1B-216ENST00000537335 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
POLR1B-216ENST00000537335 ZNF646O15015 1829 aaPredicted RBP10.07□□□□□ -0.8
POLR1B-216ENST00000537335 MYF5P13349 255 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 CEACAM3P40198 252 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 ZXDCQ2QGD7 858 aaPredicted RBP10.06□□□□□ -0.8
POLR1B-216ENST00000537335 RSPO2Q6UXX9 243 aaPredicted RBP10.06□□□□□ -0.8
POLR1B-216ENST00000537335 RNASE8Q8TDE3 154 aaKnown RBP10.06□□□□□ -0.8
POLR1B-216ENST00000537335 TJP1Q07157 1748 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 C1orf122Q6ZSJ8 110 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 STPG4Q8N801 248 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 WDR31Q8NA23 367 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 MBNL3Q9NUK0 354 aaKnown RBP10.06□□□□□ -0.8
POLR1B-216ENST00000537335 ICE1Q9Y2F5 2266 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 NKX2-8O15522 239 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 MOSP00540 346 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 LGALS7P47929 136 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 LOXL3P58215 753 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 KHDC1LQ5JSQ8 128 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 PPDPFLQ8WWR9 84 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 NBEAP1P0C6P0 100 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 SYT8Q8NBV8 401 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 SARAFQ96BY9 339 aa10.06□□□□□ -0.8
POLR1B-216ENST00000537335 SRD5A2P31213 254 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 RPL27AP46776 148 aaKnown RBP10.05□□□□□ -0.8
POLR1B-216ENST00000537335 CSRP3P50461 194 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 SSPNQ14714 243 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 CEACAM21Q3KPI0 293 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 AGMATQ9BSE5 352 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 C1orf43Q9BWL3 253 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 H3BTX0 84 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 C2orf82Q6UX34 121 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 IL23AQ9NPF7 189 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 INSIG2Q9Y5U4 225 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 PLCH1Q4KWH8 1693 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 CCL5P13501 91 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 TM4SF19Q96DZ7 209 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 FMC1Q96HJ9 113 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
POLR1B-216ENST00000537335 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 TMEM8BA6NDV4 472 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 SLAQ13239 276 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 KLHDC3Q9BQ90 382 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 NPFFR1Q9GZQ6 430 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
POLR1B-216ENST00000537335 RGPD5Q99666 1765 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 MMP23AO75900 390 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 C18orf12Q96KH6 178 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 DIDO1Q9BTC0 2240 aaKnown RBP10.04□□□□□ -0.8
POLR1B-216ENST00000537335 FAM157AC9JC47 383 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 CDKN1AP38936 164 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 CIARTQ8N365 385 aaPredicted RBP10.04□□□□□ -0.8
POLR1B-216ENST00000537335 DRAM1Q8N682 238 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 CLEC7AQ9BXN2 247 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 CCL25O15444 150 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 APELAP0DMC3 54 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
POLR1B-216ENST00000537335 ASPHD2Q6ICH7 369 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
POLR1B-216ENST00000537335 MORN3Q6PF18 240 aaPredicted RBP10.04□□□□□ -0.8
POLR1B-216ENST00000537335 COX7A1P24310 79 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 GNB2P62879 340 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 Q0VG73 95 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 ZNF56Q15929 161 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 KLF17Q5JT82 389 aaPredicted RBP10.04□□□□□ -0.8
POLR1B-216ENST00000537335 FAM27BQ5VT28 67 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 AKAP11Q9UKA4 1901 aa10.04□□□□□ -0.8
POLR1B-216ENST00000537335 PSMB11A5LHX3 300 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 PLNP26678 52 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 INO80CQ6PI98 192 aaPredicted RBP10.03□□□□□ -0.8
POLR1B-216ENST00000537335 SERGEFQ9UGK8 458 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 FZR1Q9UM11 496 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 TRAV21A0A0B4J279 112 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 LILRA5A6NI73 299 aa10.03□□□□□ -0.8
POLR1B-216ENST00000537335 SMAD7O15105 426 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms