RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 Q6ZSR3 168 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 SSC4DQ8WTU2 575 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 REPIN1Q9BWE0 567 aaKnown RBP4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PLXND1Q9Y4D7 1925 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 C7orf71A4D174 169 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PLAUP00749 431 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 ATP5IP56385 69 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-213ENST00000537002 DCAF12Q5T6F0 453 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 FGFRL1Q8N441 504 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PILRAQ9UKJ1 303 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 GCHFRP30047 84 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 KIR2DS2P43631 304 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PAX2Q02962 417 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 SFTPA2Q8IWL1 248 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF525Q8N782 197 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 LRRC29Q8WV35 223 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM171Q8WVE6 324 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 MRPL13Q9BYD1 178 aaKnown RBP4.58□□□□□ -1.68
PTPRD-213ENST00000537002 CRIM1Q9NZV1 1036 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 UFC1Q9Y3C8 167 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 SPTY2D1-AS1A0A0U1RR47 76 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1B0GWB2 263 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1W2PRD5 423 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1W2PRF3 423 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1W2PRM7 423 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PRNTQ86SH4 94 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 DEFB125Q8N687 156 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PAXXQ9BUH6 204 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 CHRNA10Q9GZZ6 450 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 AAMDCQ9H7C9 122 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PLSCR4Q9NRQ2 329 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PRR19A6NJB7 356 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 H7C2G1 150 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 RRHO14718 337 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 PLAURQ03405 335 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 STPG4Q8N801 248 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 HIST1H4GQ99525 98 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 AP5S1Q9NUS5 200 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF319Q9P2F9 582 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 IGKV1D-8A0A087WSZ0 117 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 IGHV3-21A0A0B4J1V1 117 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 hADV38S2A0JD32 116 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 MS4A18H0YCH9 400 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 MS4A18Q3C1V0 323 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM95Q3KNT9 176 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 SLC25A40Q8TBP6 338 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF721Q8TF20 911 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 C19orf24Q9BVV8 132 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 SFXN3Q9BWM7 321 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 IGKV1D-43A0A0B4J1Z2 117 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 FOXS1O43638 330 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 Q6ZWC4 215 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 SHANK1Q9Y566 2161 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TRGV10A0A0A0MS01 117 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 A0A0A6YYD4 124 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 OOEPA6NGQ2 149 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 CD27P26842 260 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 CDKN1AP38936 164 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 RNFT1Q5M7Z0 435 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 GRAMD2BQ96HH9 432 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 OSTCQ9NRP0 149 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 GAGE12BA1L429 117 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 NPIPB11E5RHQ5 1161 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 H3BTX0 84 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TIMP3P35625 211 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 VMA21Q3ZAQ7 101 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 KRTCAP3Q53RY4 240 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TPRX1Q8N7U7 411 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 RNF115Q9Y4L5 304 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 WIPF3A6NGB9 483 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 SYNGR1O43759 233 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 CD46P15529 392 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF418Q8TF45 676 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-213ENST00000537002 SPSB4Q96A44 273 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 RABAC1Q9UI14 185 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 IGLC7A0M8Q6 106 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 NCBP2LA6PVI3 153 aaKnown RBP4.57□□□□□ -1.68
PTPRD-213ENST00000537002 DNPH1O43598 174 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 NAPSAO96009 420 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 GNB2P62879 340 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 RPL31P62899 125 aaKnown RBP4.57□□□□□ -1.68
PTPRD-213ENST00000537002 RPL11P62913 178 aaKnown RBP4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM177Q53S58 311 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 LILRA6Q6PI73 481 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 WFDC8Q8IUA0 241 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 ZDHHC16Q969W1 377 aa4.57□□□□□ -1.68
PTPRD-213ENST00000537002 TRBV6-6A0A0A6YYG2 114 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 AHRRA9YTQ3 701 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 M0R1B8 84 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CTSBP07858 339 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CD40P25942 277 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CEACAM8P31997 349 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-213ENST00000537002 EMP1P54849 157 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 ATP5L2Q7Z4Y8 100 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 PKIBQ9C010 78 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 NPVFQ9HCQ7 196 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 COL4A3Q01955 1670 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms