RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CHD5Q8TDI0 1954 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 TRAV38-1A0A0B4J264 116 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 LEPROTO15243 131 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 RPP14O95059 124 aaKnown RBP2.22□□□□□ -2.05
PRKDC-208ENST00000536710 LGALS1P09382 135 aaKnown RBP2.22□□□□□ -2.05
PRKDC-208ENST00000536710 OR5G3P0C626 314 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 FGF6P10767 208 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 CD79AP11912 226 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 DEFA4P12838 97 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 MSNP26038 577 aaKnown RBP2.22□□□□□ -2.05
PRKDC-208ENST00000536710 EMP1P54849 157 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 RAB14P61106 215 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 ZNF791Q3KP31 576 aaPredicted RBP2.22□□□□□ -2.05
PRKDC-208ENST00000536710 C9orf64Q5T6V5 341 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 OR8B12Q8NGG6 310 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 SLC7A6Q92536 515 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 KLK6Q92876 244 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 KLF6Q99612 283 aaPredicted RBP2.22□□□□□ -2.05
PRKDC-208ENST00000536710 CMTM6Q9NX76 183 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 FUT9Q9Y231 359 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 MYO16Q9Y6X6 1858 aa2.22□□□□□ -2.05
PRKDC-208ENST00000536710 ZNF532Q9HCE3 1301 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 GGT3PA6NGU5 568 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 ZNF860A6NHJ4 632 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 J3QKU1 62 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 PSMD12O00232 456 aaPredicted RBP2.21□□□□□ -2.06
PRKDC-208ENST00000536710 DSCAMO60469 2012 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 PPBPP02775 128 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 DCCP43146 1447 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 OMPP47874 163 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 IDH3GP51553 393 aaPredicted RBP2.21□□□□□ -2.06
PRKDC-208ENST00000536710 IFITM2Q01629 132 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 RELAQ04206 551 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 GUK1Q16774 197 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 RGS21Q2M5E4 152 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 TMEM86BQ8N661 226 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 ZNF676Q8N7Q3 588 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 TRPM6Q9BX84 2022 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 VCX3BQ9H321 246 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 VPS29Q9UBQ0 182 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 RSL24D1Q9UHA3 163 aaKnown RBP2.21□□□□□ -2.06
PRKDC-208ENST00000536710 TIMM22Q9Y584 194 aa2.21□□□□□ -2.06
PRKDC-208ENST00000536710 TOP2AP11388 1531 aaKnown RBP2.21□□□□□ -2.06
PRKDC-208ENST00000536710 CFTRP13569 1480 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 SNAPC4Q5SXM2 1469 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 MRC2Q9UBG0 1479 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 TRBV20OR9-2A0A075B6H5 130 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 TRAV7A0A075B6U4 112 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 H7C2G1 150 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 HLA-DMBP28068 263 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 CDKN2CP42773 168 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 ALKAL1Q6UXT8 129 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 DOHHQ9BU89 302 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 ADAMTS7Q9UKP4 1686 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 KDM5BQ9UGL1 1544 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 COL4A2P08572 1712 aa2.2□□□□□ -2.06
PRKDC-208ENST00000536710 REREQ9P2R6 1566 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 URB2Q14146 1524 aaKnown RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 A0A0J9YY10 115 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 A0A1B0GX78 115 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 HMSDA8MTL9 139 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 NOS1APO75052 506 aaPredicted RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 PGLYRP1O75594 196 aaPredicted RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 S100A6P06703 90 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 SERPINA6P08185 405 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 CCL5P13501 91 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 ANP32AP39687 249 aaKnown RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 HIST1H4AP62805 103 aaKnown RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 PCOTHQ58A44 107 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 ZNF565Q8N9K5 539 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 OR52E6Q96RD3 313 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 EFCAB1Q9HAE3 211 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 TARBP1Q13395 1621 aaKnown RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 DENND4BO75064 1496 aaPredicted RBP2.19□□□□□ -2.06
PRKDC-208ENST00000536710 FANCD2Q9BXW9 1451 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 CEP164Q9UPV0 1460 aa2.19□□□□□ -2.06
PRKDC-208ENST00000536710 WDR97A6NE52 1622 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 CHD1O14646 1710 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 IGHV1-18A0A0C4DH31 117 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 CLDN24A6NM45 220 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 ZNF705FA8MVS1 300 aaPredicted RBP2.18□□□□□ -2.06
PRKDC-208ENST00000536710 SULT1A3P0DMM9 295 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 SULT1A4P0DMN0 295 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 PSME3P61289 254 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 AESQ08117 197 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 C20orf196Q8IYI0 205 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 C1orf158Q8N1D5 194 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 CLDN22Q8N7P3 220 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 DCUN1D1Q96GG9 259 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 PPP1R2P1Q96PQ5 205 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 WDR61Q9GZS3 305 aaKnown RBP2.18□□□□□ -2.06
PRKDC-208ENST00000536710 OR51V1Q9H2C8 321 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 CISHQ9NSE2 258 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 IL36BQ9NZH7 164 aa2.18□□□□□ -2.06
PRKDC-208ENST00000536710 EIF4G3O43432 1585 aaKnown RBP2.18□□□□□ -2.06
PRKDC-208ENST00000536710 RIMBP3CA6NJZ7 1639 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms