RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
LIG1-203ENST00000536218 ZNF83P51522 516 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 NHLH1Q02575 133 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 TAX1BP3O14907 124 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
LIG1-203ENST00000536218 CNEP1R1Q8N9A8 125 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 TRIB1Q96RU8 372 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 ZNF391Q9UJN7 358 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 ZNF292O60281 2723 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 OR7C2O60412 319 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 UCP1P25874 307 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 LRRC10Q5BKY1 277 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 Q6ZPA2 131 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 APOBEC3DQ96AK3 386 aaPredicted RBP11.69□□□□□ -0.54
LIG1-203ENST00000536218 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
LIG1-203ENST00000536218 LYZL6O75951 148 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 CA2P00918 260 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 BCL3P20749 454 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 ARR3P36575 388 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 Q0VG73 95 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 COLCA1Q6ZS62 124 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 MDP1Q86V88 176 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 MUC15Q8N387 334 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 OR4F17Q8NGA8 305 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 OR5D13Q8NGL4 314 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 KCNS1Q96KK3 526 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 POM121L2Q96KW2 1035 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 ZNF488Q96MN9 340 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
LIG1-203ENST00000536218 S1PR2O95136 353 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 CLDN1O95832 211 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 SCTP09683 121 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 PSG2P11465 335 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 IGLL1P15814 213 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 TGFBR3Q03167 851 aa11.68□□□□□ -0.54
LIG1-203ENST00000536218 FGF23Q9GZV9 251 aaPredicted RBP11.68□□□□□ -0.54
LIG1-203ENST00000536218 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 CELA3BP08861 270 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 PSG9Q00887 426 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 NRN1LQ496H8 165 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 ACSF3Q4G176 576 aaPredicted RBP11.67□□□□□ -0.54
LIG1-203ENST00000536218 MUC21Q5SSG8 566 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 PNKDQ8N490 385 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 SPENQ96T58 3664 aaKnown RBP11.67□□□□□ -0.54
LIG1-203ENST00000536218 OR8I2Q8N0Y5 310 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
LIG1-203ENST00000536218 SRIP30626 198 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 VWA1Q6PCB0 445 aa11.67□□□□□ -0.54
LIG1-203ENST00000536218 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 SYNGR1O43759 233 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 TIMP3P35625 211 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 OCC1Q8TAD7 63 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 TRAV9-2A0A087WT02 112 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 COX5AP20674 150 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 CA6P23280 308 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 RBM11P57052 281 aaKnown RBP11.66□□□□□ -0.54
LIG1-203ENST00000536218 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 OR10P1Q8NGE3 313 aa11.66□□□□□ -0.54
LIG1-203ENST00000536218 M0R1X1 148 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 PDCD6O75340 191 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 PGLYRP1O75594 196 aaPredicted RBP11.65□□□□□ -0.54
LIG1-203ENST00000536218 CTXN2P0C2S0 81 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 TCL1AP56279 114 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 OR1N2Q8NGR9 330 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 NEUROG1Q92886 237 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 QTRT1Q9BXR0 403 aaKnown RBP11.65□□□□□ -0.54
LIG1-203ENST00000536218 TNRC6AQ8NDV7 1962 aaKnown RBP11.65□□□□□ -0.54
LIG1-203ENST00000536218 C17orf112F2Z3M2 114 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 S100GP29377 79 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 ASCL4Q6XD76 172 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 TMEM186Q96B77 213 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 IL36BQ9NZH7 164 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
LIG1-203ENST00000536218 PDE6DO43924 150 aa11.65□□□□□ -0.55
LIG1-203ENST00000536218 TFF3Q07654 80 aa11.65□□□□□ -0.55
LIG1-203ENST00000536218 PMCHL1Q16048 86 aa11.65□□□□□ -0.55
LIG1-203ENST00000536218 ZNF324BQ6AW86 544 aaPredicted RBP11.65□□□□□ -0.55
LIG1-203ENST00000536218 TRAV8-6A0A0B4J262 113 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 TRAV38-1A0A0B4J264 116 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
LIG1-203ENST00000536218 CEACAM21Q3KPI0 293 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 WFDC12Q8WWY7 111 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
LIG1-203ENST00000536218 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 AKAP13Q12802 2813 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 H0Y980 276 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 F2RP25116 425 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 TCF15Q12870 199 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 GCSAMLQ5JQS6 135 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 MMD2Q8IY49 270 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 ZNF439Q8NDP4 499 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 DCHS1Q96JQ0 3298 aa11.64□□□□□ -0.55
LIG1-203ENST00000536218 SCO2A0A1W2PP80 73 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms