RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 IFT46Q9NQC8 304 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 CCL28Q9NRJ3 127 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 THYN1Q9P016 225 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 CEPT1Q9Y6K0 416 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 HPRT1P00492 218 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 CLEC2LP0C7M8 214 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 AREGP15514 252 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 CTRB1P17538 263 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 FXYD4P59646 89 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 KLK9Q2XQG4 91 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 DEFB114Q30KQ6 69 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 KCTD21Q4G0X4 260 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 THOC7Q6I9Y2 204 aaKnown RBP9.93□□□□□ -0.82
RTN3-207ENST00000536011 SLC16A13Q7RTY0 426 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 GVQW1Q8N7I0 195 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 OR5AP2Q8NGF4 316 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 OR5H6Q8NGV6 325 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 GIMAP1Q8WWP7 306 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 S100A16Q96FQ6 103 aaKnown RBP9.93□□□□□ -0.82
RTN3-207ENST00000536011 PLEKHA3Q9HB20 300 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 VCX3AQ9NNX9 186 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 ZC4H2Q9NQZ6 224 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
RTN3-207ENST00000536011 RYR2Q92736 4967 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 ZNF320A2RRD8 509 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 A8MWP6 167 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 SULT1C2O00338 296 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 OR2C1O95371 312 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 BRWD1-AS2P59051 145 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 ERVK-16P61578 105 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 ANKRD55Q3KP44 614 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 AADACL3Q5VUY0 350 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 ZFAND6Q6FIF0 208 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 HSD17B13Q7Z5P4 300 aaPredicted RBP9.92□□□□□ -0.82
RTN3-207ENST00000536011 TMEM17Q86X19 198 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 DMBX1Q8NFW5 382 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 CCDC140Q96MF4 163 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 PLEKHA2Q9HB19 425 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
RTN3-207ENST00000536011 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 XRCC3O43542 346 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 NDUFB8O95169 186 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 HLA-AP01891 365 aaKnown RBP9.91□□□□□ -0.82
RTN3-207ENST00000536011 CBLN1P23435 193 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 TAS2R46P59540 309 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 OR2B8PP59922 312 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 ZNF57Q68EA5 555 aaPredicted RBP9.91□□□□□ -0.82
RTN3-207ENST00000536011 ADAMTSL5Q6ZMM2 481 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 CMTM1Q8IZ96 169 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 GPHA2Q96T91 129 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 QTRT1Q9BXR0 403 aaKnown RBP9.91□□□□□ -0.82
RTN3-207ENST00000536011 RNF167Q9H6Y7 350 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 EHFQ9NZC4 300 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 DMRT1Q9Y5R6 373 aa9.91□□□□□ -0.82
RTN3-207ENST00000536011 LCE6AA0A183 80 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 A0A1B0GW64 132 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 ZNF785A8K8V0 405 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 OR11H12B2RN74 326 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 E7EUB6 86 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 UPK2O00526 184 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 REG1AP05451 166 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 PTHLHP12272 177 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 TMEM69Q5SWH9 247 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 ZNF818PQ6ZRF7 136 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 SRD5A3Q9H8P0 318 aa9.9□□□□□ -0.82
RTN3-207ENST00000536011 TENM2Q9NT68 2774 aa9.9□□□□□ -0.83
RTN3-207ENST00000536011 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 IGLC7A0M8Q6 106 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 CLEC3BP05452 202 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 FCER2P06734 321 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 CD7P09564 240 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 MYOD1P15172 320 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 S100GP29377 79 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
RTN3-207ENST00000536011 DEFB125Q8N687 156 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 GDPD1Q8N9F7 314 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 OR52B4Q8NGK2 314 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 WDR89Q96FK6 387 aaPredicted RBP9.89□□□□□ -0.83
RTN3-207ENST00000536011 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 UFC1Q9Y3C8 167 aa9.89□□□□□ -0.83
RTN3-207ENST00000536011 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 MEIS3P1A6NDR6 274 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 MFSD2BA6NFX1 497 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms