RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 RD3LP0DJH9 198 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 CHRNA7P36544 502 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 NUBP1P53384 320 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 RAB31Q13636 194 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 OR5T1Q8NG75 326 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 LEAP2Q969E1 77 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 GCM1Q9NP62 436 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 IL19Q9UHD0 177 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 ICE1Q9Y2F5 2266 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 MRPS11P82912 194 aaKnown RBP13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 POU2AF1Q16633 256 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 UTF1Q5T230 341 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 SLC24A4Q8NFF2 622 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 TMEM204Q9BSN7 226 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 LINC00574Q9H8X3 128 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 FAM215AQ9Y5M1 114 aa13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
CHMP1A-202ENST00000535997 AMBPP02760 352 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 NPY1RP25929 384 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 TIMP3P35625 211 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 JOSD1Q15040 202 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 C9orf152Q5JTZ5 239 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 FAM201AQ5SY85 155 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 OR5R1Q8NH85 324 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 DERL1Q9BUN8 251 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 FNDC10F2Z333 226 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 SELLP14151 372 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 RHOBP62745 196 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 GAMTQ14353 236 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 STUMQ69YW2 141 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 ZNF439Q8NDP4 499 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 CORO2AQ92828 525 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 CHODLQ9H9P2 273 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 FUT9Q9Y231 359 aa13.18□□□□□ -0.3
CHMP1A-202ENST00000535997 TM4SF5O14894 197 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 IL6RP08887 468 aaPredicted RBP13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 DEFA6Q01524 100 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 EFNB3Q15768 340 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 LYG1Q8N1E2 194 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 SSMEM1Q8WWF3 244 aa13.17□□□□□ -0.3
CHMP1A-202ENST00000535997 BMP5P22003 454 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 PKIAP61925 76 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 TNFAIP6P98066 277 aaPredicted RBP13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 TMEM30BQ3MIR4 351 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 C1orf185Q5T7R7 199 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 STPG3Q8N7X2 389 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 SFRP2Q96HF1 295 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 IDI2-AS1Q9NZ38 188 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 PRNDQ9UKY0 176 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 PLCE1Q9P212 2302 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 MT-CO2P00403 227 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 CA2P00918 260 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 Q6ZS92 163 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 SFXN3Q9BWM7 321 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 SEPSECSQ9HD40 501 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 AURKAIP1Q9NWT8 199 aaPredicted RBP13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 ZNF257Q9Y2Q1 563 aa13.16□□□□□ -0.3
CHMP1A-202ENST00000535997 TRBV20OR9-2A0A075B6H5 130 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 IGHV1-46P01743 117 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 TNFSF4P23510 183 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 IL3RAP26951 378 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 GCHFRP30047 84 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 RPRMLQ8N4K4 120 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 ZCCHC14Q8WYQ9 949 aaKnown RBP13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 GAFA1Q96PS6 74 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 OR51B2Q9Y5P1 312 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 TANC2Q9HCD6 1990 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 TTC28Q96AY4 2481 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 BOD1L1Q8NFC6 3051 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 A0A0U1RQK1 487 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 ZNF320A2RRD8 509 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 TSTD3H0UI37 97 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 C1QTNF9P0C862 333 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 GZMBP10144 247 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 ATP5IP56385 69 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 ZNF114Q8NC26 417 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 NEUROG1Q92886 237 aa13.15□□□□□ -0.3
CHMP1A-202ENST00000535997 RPL15P61313 204 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 PRR20EP86478 221 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 PRR20CP86479 221 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 PRR20DP86480 221 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 PRR20BP86481 221 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 PRR20AP86496 221 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 DUX4L9Q6RFH8 374 aaPredicted RBP13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 TCF23Q7RTU1 214 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 SGMS2Q8NHU3 365 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 MDFIC2A0A1B0GVS7 189 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 PGPEP1LA6NFU8 196 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 J3QR06 171 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 GCGP01275 180 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms