RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TCF19Q9Y242 345 aa10.85□□□□□ -0.67
LDLR-203ENST00000535915 ATMQ13315 3056 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 A8MWP6 167 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 MKRN2OSH3BPM6 223 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 GYPAP02724 150 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 TIMP3P35625 211 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 GATA4P43694 442 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 GALR1P47211 349 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 FAM27E3Q08E93 113 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 MS4A5Q9H3V2 200 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 PFN1P07737 140 aaKnown RBP10.84□□□□□ -0.67
LDLR-203ENST00000535915 CST9LP1Q5W188 147 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 LYG1Q8N1E2 194 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 OR5R1Q8NH85 324 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 SDSLQ96GA7 329 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 IL19Q9UHD0 177 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 GAB2Q9UQC2 676 aa10.84□□□□□ -0.67
LDLR-203ENST00000535915 C15orf61A6NNL5 157 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 K7EM74 188 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 ITGB1BP1O14713 200 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 IGHV1-46P01743 117 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 OPRK1P41145 380 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 C22orf34Q6ZV56 151 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 OR5T1Q8NG75 326 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 FAM222BQ8WU58 562 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 RAB1CQ92928 201 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 NOL4LQ96MY1 436 aaPredicted RBP10.83□□□□□ -0.68
LDLR-203ENST00000535915 MGST2Q99735 147 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 SFXN3Q9BWM7 321 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 ZGRF1Q86YA3 2104 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 PRSS46E5RG02 174 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 SOX15O60248 233 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 CRYABP02511 175 aaKnown RBP10.83□□□□□ -0.68
LDLR-203ENST00000535915 RAB4AP20338 218 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 THBS3P49746 956 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 GNG10P50151 68 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 MRPS11P82912 194 aaKnown RBP10.83□□□□□ -0.68
LDLR-203ENST00000535915 CLEC12BQ2HXU8 276 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 STUMQ69YW2 141 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 OR4A47Q6IF82 309 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 RBMXL3Q8N7X1 1067 aaKnown RBP10.83□□□□□ -0.68
LDLR-203ENST00000535915 OR51G1Q8NGK1 321 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 TMEM170AQ8WVE7 144 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 CCL13Q99616 98 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 NCOR1P1Q9H4R4 102 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 PXMP4Q9Y6I8 212 aa10.83□□□□□ -0.68
LDLR-203ENST00000535915 TRGV8A0A0C4DH27 118 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 NPPCP23582 126 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ATP5G3P48201 142 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 MIC13Q5XKP0 118 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.82□□□□□ -0.68
LDLR-203ENST00000535915 ELOVL1Q9BW60 279 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 GGTLC1Q9BX51 225 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 SRD5A3Q9H8P0 318 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 RIF1Q5UIP0 2472 aaKnown RBP10.82□□□□□ -0.68
LDLR-203ENST00000535915 PDE6DO43924 150 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 VENTXO95231 258 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 PAX1P15863 534 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 TNFSF4P23510 183 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 TMPRSS3P57727 454 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ANAPC16Q96DE5 110 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 GAFA1Q96PS6 74 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 NPVFQ9HCQ7 196 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 TNCP24821 2201 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 HRASP01112 189 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ZNF25P17030 456 aaPredicted RBP10.82□□□□□ -0.68
LDLR-203ENST00000535915 CD40P25942 277 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 FAM216BQ8N7L0 139 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 OR4X1Q8NH49 305 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 ENY2Q9NPA8 101 aa10.82□□□□□ -0.68
LDLR-203ENST00000535915 BSNQ9UPA5 3926 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 ZNF705GA8MUZ8 300 aaPredicted RBP10.81□□□□□ -0.68
LDLR-203ENST00000535915 A8MXE2 369 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 PPP5D1E7EU14 171 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 EREGO14944 169 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 IRF2P14316 349 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 NPY1RP25929 384 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
LDLR-203ENST00000535915 HSPE1P61604 102 aaKnown RBP10.81□□□□□ -0.68
LDLR-203ENST00000535915 GNB1P62873 340 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 TCF23Q7RTU1 214 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 SLC24A4Q8NFF2 622 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 PYGO2Q9BRQ0 406 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 HINT2Q9BX68 163 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 IDI2-AS1Q9NZ38 188 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 KLK10O43240 276 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 NDUFB4O95168 129 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 TMEM249Q2WGJ8 235 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 TGIF2LYQ8IUE0 185 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 BEND2Q8NDZ0 799 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 FAM57AQ8TBR7 257 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 ADTRPQ96IZ2 230 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 PCGF1Q9BSM1 259 aa10.81□□□□□ -0.68
LDLR-203ENST00000535915 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms