RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NEGR1Q7Z3B1 354 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 LYPD1Q8N2G4 141 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 TRIML2Q8N7C3 387 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 LY6G5BQ8NDX9 201 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 OR4C5Q8NGB2 326 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 OR13G1Q8NGZ3 307 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 OR51A7Q8NH64 312 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.42□□□□□ -1.86
CASP4-213ENST00000534356 TAMM41Q96BW9 452 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 B9D2Q9BPU9 175 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 ZNF426Q9BUY5 554 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 CDCA4Q9BXL8 241 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 SLC19A3Q9BZV2 496 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 RERGLQ9H628 205 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 TMEM100Q9NV29 134 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 MRPL22Q9NWU5 206 aaKnown RBP3.42□□□□□ -1.86
CASP4-213ENST00000534356 IL20Q9NYY1 176 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 CALML5Q9NZT1 146 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 RPUSD1Q9UJJ7 312 aaKnown RBP3.42□□□□□ -1.86
CASP4-213ENST00000534356 TSSC4Q9Y5U2 329 aaPredicted RBP3.42□□□□□ -1.86
CASP4-213ENST00000534356 U3KQK5 164 aa3.42□□□□□ -1.86
CASP4-213ENST00000534356 KIAA2026Q5HYC2 2103 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 LCE6AA0A183 80 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 A0A1W2PRG6 482 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 OR6C6A6NF89 314 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 IQCF6A8MYZ5 107 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 POLR3GO15318 223 aaPredicted RBP3.41□□□□□ -1.86
CASP4-213ENST00000534356 SGCEO43556 437 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 CHP2O43745 196 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 SERPINE1P05121 402 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 IL6P05231 212 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
CASP4-213ENST00000534356 TSPAN19P0C672 248 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 GSTM3P21266 225 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 OPRK1P41145 380 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 RPS27P42677 84 aaKnown RBP3.41□□□□□ -1.86
CASP4-213ENST00000534356 KIR3DL2P43630 455 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 OR1E2P47887 323 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 SRP9P49458 86 aaKnown RBP3.41□□□□□ -1.86
CASP4-213ENST00000534356 WHAMMP3Q1A5X7 153 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 TBPL2Q6SJ96 375 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 C5orf46Q6UWT4 87 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 DPPA2Q7Z7J5 298 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 IFT20Q8IY31 132 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 OSR2Q8N2R0 312 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 OR2AE1Q8NHA4 323 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 RMI2Q96E14 147 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 SGTBQ96EQ0 304 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 Q96M85 177 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 MICU1Q9BPX6 476 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 VCX3BQ9H321 246 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 TXNIPQ9H3M7 391 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 ARMC7Q9H6L4 198 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 ZNF229Q9UJW7 825 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 RHBDD3Q9Y3P4 386 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 KIAA1109Q2LD37 5005 aa3.41□□□□□ -1.86
CASP4-213ENST00000534356 TRAPPC13A5PLN9 417 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 BPY2O14599 106 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 FKBP6O75344 327 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 LHBP01229 141 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 FBP1P09467 338 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 CELP19835 753 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 MSR1P21757 451 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 CD24P25063 80 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 OTX1P32242 354 aaPredicted RBP3.4□□□□□ -1.87
CASP4-213ENST00000534356 CD200P41217 278 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 ETV1P50549 477 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 GZMMP51124 257 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 SLC18A1P54219 525 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 MTPNP58546 118 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 NCALDP61601 193 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 CACNG7P62955 275 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 EMX1Q04741 257 aaPredicted RBP3.4□□□□□ -1.87
CASP4-213ENST00000534356 STX3Q13277 289 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 PRSS8Q16651 343 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 ZNF181Q2M3W8 571 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 MESTQ5EB52 335 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 GPR107Q5VW38 600 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 NDUFA11Q86Y39 141 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 CMTM1Q8IZ96 169 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 LRRC29Q8WV35 223 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 H1FXQ92522 213 aaKnown RBP3.4□□□□□ -1.87
CASP4-213ENST00000534356 SLC35B4Q969S0 331 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 RBP7Q96R05 134 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 FGF23Q9GZV9 251 aaPredicted RBP3.4□□□□□ -1.87
CASP4-213ENST00000534356 EDA2RQ9HAV5 297 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 MTCH1Q9NZJ7 389 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 NDUFAF1Q9Y375 327 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 LHFPL6Q9Y693 200 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 DSCAML1Q8TD84 2053 aa3.4□□□□□ -1.87
CASP4-213ENST00000534356 TNCP24821 2201 aa3.39□□□□□ -1.87
CASP4-213ENST00000534356 IGKV1D-17A0A075B6S4 117 aa3.39□□□□□ -1.87
CASP4-213ENST00000534356 CD300LBA8K4G0 201 aa3.39□□□□□ -1.87
CASP4-213ENST00000534356 F5H5K5 113 aa3.39□□□□□ -1.87
CASP4-213ENST00000534356 SMKR1H3BMG3 65 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms