RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF19P17023 458 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ALOX5APP20292 161 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 PRKACBP22694 351 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 BMI1P35226 326 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 IFNGR2P38484 337 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 KIR2DS2P43631 304 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 WNT4P56705 351 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 SMIM11AP58511 58 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 RRAS2P62070 204 aaPredicted RBP2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 MLLT11Q13015 90 aaPredicted RBP2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ASAH1Q13510 395 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 IRF3Q14653 427 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF146Q15072 292 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 CDK5R1Q15078 307 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 FCN2Q15485 313 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 C5orf64Q2M2E5 130 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ACTBL2Q562R1 376 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 CT45A1Q5HYN5 189 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 PQLC2Q6ZP29 291 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 Q6ZR54 194 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF767PQ75MW2 155 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 CCDC190Q86UF4 302 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 POM121L12Q8N7R1 296 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 SAMD12Q8N8I0 201 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 BBS1Q8NFJ9 593 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 OR10V1Q8NGI7 309 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 OR5D18Q8NGL1 313 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 OR6F1Q8NGZ6 308 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 CT45A3Q8NHU0 189 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 OTOSQ8NHW6 89 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 SETD6Q8TBK2 473 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZFAND1Q8TCF1 268 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 C7orf34Q96L11 122 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 CHRDL1Q9BU40 450 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 BARHL1Q9BZE3 327 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 C12orf4Q9NQ89 552 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 NDUFB11Q9NX14 153 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 MGAT4AQ9UM21 535 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 PRELID1Q9Y255 219 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 EXOSC1Q9Y3B2 195 aaKnown RBP2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 AMMECR1Q9Y4X0 333 aaPredicted RBP2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 CDH10Q9Y6N8 788 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 V9GYH0 126 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 V9GYS6 101 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 A0A075B6Q4 140 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 IGHV4-4A0A075B6R2 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 A0A0B4J203 849 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 TRBV2A0A0J9YWF9 115 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 MEIS3P1A6NDR6 274 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ACOD1A6NK06 481 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 RIIAD1A6NNX1 92 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 PPP5D1E7EU14 171 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 C15orf65H3BRN8 121 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SDCBPO00560 298 aaPredicted RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ARPC1BO15143 372 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 NBR2O15453 112 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SRSF10O75494 262 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE7O76087 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 KDM4BO94953 1096 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 IGLV2-11P01706 119 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 C1QBP02746 253 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 PRH1P02810 166 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SMR3BP02814 79 aaPredicted RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 RLN1P04808 185 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 EIF4EP06730 217 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 CD3GP09693 182 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE12FP0CL80 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE12GP0CL81 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE12IP0CL82 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ANXA3P12429 323 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 CELP19835 753 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ZP3P21754 424 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 HLA-DMBP28068 263 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 OR3A3P47888 321 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 CCR6P51684 374 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 FUT6P51993 359 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 MTCP1P56278 107 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 OR10A3P58181 314 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 TSPAN5P62079 268 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 FABP5Q01469 135 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 TSPAN31Q12999 210 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE1Q13065 139 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE4Q13068 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 PDZK1IP1Q13113 114 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 INSL4Q14641 139 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 P2RY14Q15391 338 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF79Q15937 498 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 LGALS9BQ3B8N2 356 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 TP53I3Q53FA7 332 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 AKIRIN2Q53H80 203 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SMUG1Q53HV7 270 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 HES5Q5TA89 166 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 C12orf73Q69YU5 71 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SLC25A48Q6ZT89 311 aaKnown RBP2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 RASSF6Q6ZTQ3 369 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 CEACAM19Q7Z692 300 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 SPATA12Q7Z6I5 190 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 LINC00596Q86U02 117 aa2.14□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM61Q8N0U2 210 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms