RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TRAV41A0A0B4J266 112 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 PSMB11A5LHX3 300 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 MSGN1A6NI15 193 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 G3V318 75 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 PTTG1O95997 202 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 HOXB5P09067 269 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 RPL27AP46776 148 aaKnown RBP13.76□□□□□ -0.21
NXF1-216ENST00000533499 MRGPRG-AS1Q2M3A8 158 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 STPG2Q8N412 459 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 LFNGQ8NES3 379 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 CHPT1Q8WUD6 406 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 SRSF12Q8WXF0 261 aaKnown RBP13.76□□□□□ -0.21
NXF1-216ENST00000533499 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 MDFIQ99750 246 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 FBXO7Q9Y3I1 522 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 OR51B2Q9Y5P1 312 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 MMP24Q9Y5R2 645 aa13.76□□□□□ -0.21
NXF1-216ENST00000533499 A0A0G2JRQ6 117 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 DHFRP00374 187 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 MAS1LP35410 378 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 COMPP49747 757 aaPredicted RBP13.75□□□□□ -0.21
NXF1-216ENST00000533499 SLC35B1P78383 322 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 TMEM267Q0VDI3 215 aaPredicted RBP13.75□□□□□ -0.21
NXF1-216ENST00000533499 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 GPR146Q96CH1 333 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 ALX4Q9H161 411 aaPredicted RBP13.75□□□□□ -0.21
NXF1-216ENST00000533499 GPN1Q9HCN4 374 aaPredicted RBP13.75□□□□□ -0.21
NXF1-216ENST00000533499 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 PRNDQ9UKY0 176 aa13.75□□□□□ -0.21
NXF1-216ENST00000533499 A0A0B4J2A0 478 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 NXPH3O95157 252 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
NXF1-216ENST00000533499 MECP2P51608 486 aaKnown RBP13.74□□□□□ -0.21
NXF1-216ENST00000533499 SSBP2P81877 361 aaPredicted RBP13.74□□□□□ -0.21
NXF1-216ENST00000533499 C10orf99Q6UWK7 81 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 OR5T1Q8NG75 326 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 ZNF431Q8TF32 576 aaPredicted RBP13.74□□□□□ -0.21
NXF1-216ENST00000533499 SPIN2AQ99865 258 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 SPIN2BQ9BPZ2 258 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 PDCD10Q9BUL8 212 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 QTRT1Q9BXR0 403 aaKnown RBP13.74□□□□□ -0.21
NXF1-216ENST00000533499 GON7Q9BXV9 100 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 ZNF355PQ9NSJ1 428 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 SHPKQ9UHJ6 478 aa13.74□□□□□ -0.21
NXF1-216ENST00000533499 COL6A5A8TX70 2615 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 PIGBOS1A0A0B4J2F0 54 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 A0A1W2PN81 502 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 C15orf61A6NNL5 157 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 IFNA17P01571 189 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 CHRNA7P36544 502 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 PROK1P58294 105 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 SPINK9Q5DT21 86 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 KHDC1LQ5JSQ8 128 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 HIST2H2BDQ6DRA6 164 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 THOC7Q6I9Y2 204 aaKnown RBP13.73□□□□□ -0.21
NXF1-216ENST00000533499 FAM219AQ8IW50 185 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 OR1L8Q8NGR8 309 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 FKBP11Q9NYL4 201 aa13.73□□□□□ -0.21
NXF1-216ENST00000533499 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 A0A0B4J293 547 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 DBX1A6NMT0 343 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 ADAP1O75689 374 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 IFNA21P01568 189 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 IGF1P05019 195 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 IL6RP08887 468 aaPredicted RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 TRAPPC2P0DI81 140 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 TRAPPC2BP0DI82 140 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 SULT1A3P0DMM9 295 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 SULT1A4P0DMN0 295 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 EGR2P11161 476 aaPredicted RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 SRSF4Q08170 494 aaKnown RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 C12orf45Q8N5I9 185 aaPredicted RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 OR1S1Q8NH92 325 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 LSM10Q969L4 123 aaKnown RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 MARVELD1Q9BSK0 173 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
NXF1-216ENST00000533499 TET2Q6N021 2002 aaPredicted RBP13.72□□□□□ -0.21
NXF1-216ENST00000533499 DUXBA0A1W2PPF3 345 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 FAM25EA8MYX2 175 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 E7EUB6 86 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 PRAF2O60831 178 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 IL5P05113 134 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 REG1AP05451 166 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 PF4V1P10720 104 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 GGNBP1Q5YKI7 109 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 Q6ZRM9 215 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 OR4X2Q8NGF9 303 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 MITD1Q8WV92 249 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 WNT10AQ9GZT5 417 aa13.71□□□□□ -0.21
NXF1-216ENST00000533499 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.21
NXF1-216ENST00000533499 C13orf42A0A1B0GVH6 325 aa13.7□□□□□ -0.22
NXF1-216ENST00000533499 ST8SIA3O43173 380 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms