RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
PUF60-221ENST00000533162 FKBP11Q9NYL4 201 aa11.55□□□□□ -0.56
PUF60-221ENST00000533162 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
PUF60-221ENST00000533162 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
PUF60-221ENST00000533162 CMYA5Q8N3K9 4069 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 MARCH11A6NNE9 402 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 SEC14L6B5MCN3 397 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 UPK2O00526 184 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 GSTZ1O43708 216 aaPredicted RBP11.54□□□□□ -0.56
PUF60-221ENST00000533162 S1PR2O95136 353 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 AKAIN1P0CW23 69 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 APELAP0DMC3 54 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 DEFA4P12838 97 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 HIST1H1BP16401 226 aaKnown RBP11.54□□□□□ -0.56
PUF60-221ENST00000533162 ATP5G2Q06055 141 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 HSD17B13Q7Z5P4 300 aaPredicted RBP11.54□□□□□ -0.56
PUF60-221ENST00000533162 NXF2Q9GZY0 626 aaKnown RBP11.54□□□□□ -0.56
PUF60-221ENST00000533162 COPZ2Q9P299 210 aa11.54□□□□□ -0.56
PUF60-221ENST00000533162 NPIPB5A8MRT5 1133 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 OVOL1O14753 267 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 B3GALNT1O75752 331 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 KRASP01116 189 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 RPA2P15927 270 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 TNFSF8P32971 234 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 AP3S2P59780 193 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 RND3P61587 244 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 DCTN2Q13561 401 aaKnown RBP11.53□□□□□ -0.56
PUF60-221ENST00000533162 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 NECAP1Q8NC96 275 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 SCGB3A2Q96PL1 93 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 PRRT1Q99946 306 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 ELOVL1Q9BW60 279 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 THYN1Q9P016 225 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 SCP2D1Q9UJQ7 156 aa11.53□□□□□ -0.56
PUF60-221ENST00000533162 C14orf166Q9Y224 244 aaKnown RBP11.53□□□□□ -0.56
PUF60-221ENST00000533162 PTBP1P26599 531 aaKnown RBP eCLIP11.52□□□□□ -0.57
PUF60-221ENST00000533162 FAUP35544 74 aaKnown RBP11.52□□□□□ -0.57
PUF60-221ENST00000533162 PIGPP57054 158 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 RHOGP84095 191 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 PYDC2Q56P42 97 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 H2BFWTQ7Z2G1 175 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 ZNF429Q86V71 674 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 LHFPL1Q86WI0 220 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
PUF60-221ENST00000533162 ALX4Q9H161 411 aaPredicted RBP11.52□□□□□ -0.57
PUF60-221ENST00000533162 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
PUF60-221ENST00000533162 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
PUF60-221ENST00000533162 HMX3A6NHT5 357 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 WIPF1O43516 503 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 TRAPPC2P0DI81 140 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 TRAPPC2BP0DI82 140 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 PSMB6P28072 239 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 G6PCP35575 357 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 PPP5CP53041 499 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 EGFEM1PQ0D2K5 195 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 SURF2Q15527 256 aaPredicted RBP11.51□□□□□ -0.57
PUF60-221ENST00000533162 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 C10orf55Q5SWW7 151 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 ZNF343Q6P1L6 599 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 OR1L8Q8NGR8 309 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 OR4A16Q8NH70 328 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 MRAPQ8TCY5 172 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 DCUN1D4Q92564 292 aa11.51□□□□□ -0.57
PUF60-221ENST00000533162 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
PUF60-221ENST00000533162 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 A0A087WW49 117 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 ANKRD34BA5PLL1 514 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 H0Y980 276 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 RBMXL2O75526 392 aaKnown RBP11.5□□□□□ -0.57
PUF60-221ENST00000533162 CRYGCP07315 174 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
PUF60-221ENST00000533162 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
PUF60-221ENST00000533162 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
PUF60-221ENST00000533162 OR2B8PP59922 312 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 ZNF585BQ52M93 769 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 OR5B3Q8NH48 314 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 DLX4Q92988 240 aaPredicted RBP11.5□□□□□ -0.57
PUF60-221ENST00000533162 TMEM56Q96MV1 263 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 OR4C12Q96R67 309 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 THAP7Q9BT49 309 aaPredicted RBP11.5□□□□□ -0.57
PUF60-221ENST00000533162 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
PUF60-221ENST00000533162 TEX13DA0A0J9YY54 714 aaPredicted RBP11.49□□□□□ -0.57
PUF60-221ENST00000533162 ANKRD20A5PA0PJZ0 165 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 SAP30O75446 220 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 SLURP1P55000 103 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
PUF60-221ENST00000533162 RPEL1Q2QD12 228 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 TRIM16LQ309B1 348 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 C15orf32Q32M92 178 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 OR4D10Q8NGI6 311 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 OR1L6Q8NGR2 347 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 OR13C8Q8NGS7 320 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
PUF60-221ENST00000533162 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms