RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 OR4A47Q6IF82 309 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 YPEL2Q96QA6 119 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 SH3BGRL2Q9UJC5 107 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 JPT1Q9UK76 154 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 ACACAQ13085 2346 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 ERVK-16P61578 105 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 CCL8P80075 99 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 OR2T10Q8NGZ9 312 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 PYGO2Q9BRQ0 406 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 SRRM4A7MD48 611 aaKnown RBP12.24□□□□□ -0.45
SSH3-210ENST00000532881 ZNF891A8MT65 544 aaPredicted RBP12.24□□□□□ -0.45
SSH3-210ENST00000532881 CA2P00918 260 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
SSH3-210ENST00000532881 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
SSH3-210ENST00000532881 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 DDB2Q92466 427 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 GCM1Q9NP62 436 aa12.24□□□□□ -0.45
SSH3-210ENST00000532881 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 DSCAML1Q8TD84 2053 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 ELOA3CA0A087WX78 387 aaPredicted RBP12.23□□□□□ -0.45
SSH3-210ENST00000532881 IGFBP2P18065 325 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
SSH3-210ENST00000532881 NUBP1P53384 320 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 PMS2P11Q13670 270 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 PITPNC1Q9UKF7 332 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 ZGRF1Q86YA3 2104 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 ZNF320A2RRD8 509 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 SLC17A3O00476 420 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 NUPR1O60356 82 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 LHBP01229 141 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 CD33P20138 364 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 IL3RAP26951 378 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 HLA-DRB5Q30154 266 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 TMEM183AQ8IXX5 376 aa12.23□□□□□ -0.45
SSH3-210ENST00000532881 ZNF729A6NN14 1252 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 F2RL2O00254 374 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 TM4SF5O14894 197 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 IGHV3-48P01763 117 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 IL6RP08887 468 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 REG1BP48304 166 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 FAM216AQ8WUB2 273 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 MBD3L4A6NDZ8 208 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 MBD3L3A6NE82 208 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 MBD3L5A6NJ08 208 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 ZNF705GA8MUZ8 300 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 CGB3P0DN86 165 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 CGB7P0DN87 165 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 MRPS11P82912 194 aaKnown RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 STPG3Q8N7X2 389 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 OR10W1Q8NGF6 305 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 MBD3L2Q8NHZ7 208 aaPredicted RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 OCC1Q8TAD7 63 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 ZCCHC14Q8WYQ9 949 aaKnown RBP12.22□□□□□ -0.45
SSH3-210ENST00000532881 IMMP2LQ96T52 175 aa12.22□□□□□ -0.45
SSH3-210ENST00000532881 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 GZMBP10144 247 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.45
SSH3-210ENST00000532881 EFNB3Q15768 340 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 TMEM256Q8N2U0 113 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 TCTEX1D1Q8N7M0 179 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 OR4P4Q8NGL7 312 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 IDI2-AS1Q9NZ38 188 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 DYSFO75923 2080 aa12.21□□□□□ -0.45
SSH3-210ENST00000532881 ASH1LQ9NR48 2969 aaKnown RBP12.21□□□□□ -0.46
SSH3-210ENST00000532881 TNFAIP6P98066 277 aaPredicted RBP12.21□□□□□ -0.46
SSH3-210ENST00000532881 OR5I1Q13606 314 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 MIR17HGQ75NE6 70 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 SGMS2Q8NHU3 365 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 C14orf144Q96I85 54 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 DIRC2Q96SL1 478 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 LRFN3Q9BTN0 628 aa12.21□□□□□ -0.46
SSH3-210ENST00000532881 IGKV1OR2-108A0A075B7D4 117 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 KBTBD11-OT1A0A1B0GTJ5 212 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 A0A1B0GWJ7 208 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 GRIFINA4D1Z8 144 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 TMPRSS2O15393 492 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 STAG3L2P0CL84 134 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 STAG3L3P0CL85 134 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 OPRK1P41145 380 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 PTPRZ1P23471 2315 aaPredicted RBP12.2□□□□□ -0.46
SSH3-210ENST00000532881 SPINK4O60575 86 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 NDUFB7P17568 137 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 NPY1RP25929 384 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 GLRXP35754 106 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 DEFA6Q01524 100 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 DIAPH2-AS1Q14236 149 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 ACTL10Q5JWF8 245 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 GAFA1Q96PS6 74 aa12.2□□□□□ -0.46
SSH3-210ENST00000532881 E7EUB6 86 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 K7EN84 100 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
SSH3-210ENST00000532881 CCL3L1P16619 93 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 DLX1P56177 255 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 RPL31P62899 125 aaKnown RBP12.19□□□□□ -0.46
SSH3-210ENST00000532881 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 TRAT1Q6PIZ9 186 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 LHFPL4Q7Z7J7 247 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms