RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 PITX3O75364 302 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 SSTR5P35346 364 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 GLRXP35754 106 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 BSPH1Q075Z2 132 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 TRBV5-7A0A0A0MS05 114 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 TRAV21A0A0B4J279 112 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A10PA6NDY2 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A18PA6NE21 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A16PA6NEW6 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A20PA6NIJ5 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A8PA6NJQ4 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A7PA6NKC0 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A22PA8MWA6 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A12PA8MX19 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A5PA8MXJ8 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A23PA8MXZ1 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A15PP0C7V4 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A13PP0C7W8 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A14PP0C7W9 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 FAM90A24PP0C7X0 464 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 PSMG3Q9BT73 122 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-232ENST00000532649 CDS2O95674 445 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 RND2P52198 227 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 SPATA45Q537H7 98 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 AWAT1Q58HT5 328 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 ABHD12Q8N2K0 398 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 OR4D5Q8NGN0 318 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 OR5AC2Q9NZP5 309 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 MRPS18CQ9Y3D5 142 aaKnown RBP7.43□□□□□ -1.22
CTNND1-232ENST00000532649 IGKV1D-43A0A0B4J1Z2 117 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 A0A0G2JLM5 398 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 PRR32B1ATL7 298 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 SEC11BP0C7V7 166 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 IGHV1-2P23083 117 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 LHX2P50458 406 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM170BQ5T4T1 132 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM42Q69YG0 159 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 DEPPQ9NTK1 212 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 F11RQ9Y624 299 aaKnown RBP7.43□□□□□ -1.22
CTNND1-232ENST00000532649 J3QW42 95 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 NSUN5P1Q3KNT7 163 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 C1orf100Q5SVJ3 147 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 SAXO1Q8IYX7 474 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM106BQ9NUM4 274 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 RCC2Q9P258 522 aaKnown RBP7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TBL2Q9Y4P3 447 aaKnown RBP7.42□□□□□ -1.22
CTNND1-232ENST00000532649 PLA2G10O15496 165 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 FXYD3Q14802 87 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM250H0YL14 139 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TDGF1P3P51864 188 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 LEMD1Q68G75 181 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 SEMA5BQ9P283 1151 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TUBD1Q9UJT1 453 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 NCOR1O75376 2440 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 ICE1Q9Y2F5 2266 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 CXCL3P19876 107 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 MBNL2Q5VZF2 373 aaKnown RBP7.42□□□□□ -1.22
CTNND1-232ENST00000532649 FBLIM1Q8WUP2 373 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 OR5P3Q8WZ94 311 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 FAM168AQ92567 244 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 LEAP2Q969E1 77 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 DOCK4Q8N1I0 1966 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 HMSDA8MTL9 139 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
CTNND1-232ENST00000532649 RCC1P18754 421 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM177Q53S58 311 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 DNM1P46Q6ZS02 220 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 PNKDQ8N490 385 aa7.42□□□□□ -1.22
CTNND1-232ENST00000532649 TRBV20OR9-2A0A075B6H5 130 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 FOXI3A8MTJ6 420 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-232ENST00000532649 PIN1P1O15428 100 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 KLF4O43474 513 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 CD8AP01732 235 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 GLIPR1P48060 266 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF415Q09FC8 603 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 VAX1Q5SQQ9 334 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 C17orf82Q86X59 251 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-232ENST00000532649 SRSF12Q8WXF0 261 aaKnown RBP7.41□□□□□ -1.22
CTNND1-232ENST00000532649 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 HOXA5P20719 270 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 LEPP41159 167 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 SAMD13Q5VXD3 122 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 OR9G4Q8NGQ1 327 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 SDF2L1Q9HCN8 221 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 AURKAIP1Q9NWT8 199 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-232ENST00000532649 METRNQ9UJH8 293 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 HLA-DQB1P01920 261 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 C12orf54Q6X4T0 127 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF837Q96EG3 531 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-232ENST00000532649 SDK2Q58EX2 2172 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 LOC390937A0A1W2PQ73 354 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 C7orf66A4D0T2 115 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 PINLYPA6NC86 204 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 CRYBA2P53672 197 aa7.41□□□□□ -1.22
CTNND1-232ENST00000532649 F8WEM9 126 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 MT-ND6P03923 174 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 PAX1P15863 534 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 RNASE4P34096 147 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms