RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 OR51S1Q8NGJ8 323 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 SEC22AQ96IW7 307 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 OR5B12Q96R08 314 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 SDHCQ99643 169 aaPredicted RBP10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 SPIN2AQ99865 258 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 SPIN2BQ9BPZ2 258 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 SRRQ9GZT4 340 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 ALX4Q9H161 411 aaPredicted RBP10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 SLC2A8Q9NY64 477 aa10.78□□□□□ -0.68
TSPAN4-220ENST00000532375 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 MARCH11A6NNE9 402 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 KRASP01116 189 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 TRGV3P03979 118 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 PGAM2P15259 253 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 RPL27AP46776 148 aaKnown RBP10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 OR2B8PP59922 312 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 SCGB2B2Q4G0G5 96 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 Q8N402 240 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 OR11H1Q8NG94 326 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 TP53RKQ96S44 253 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 C5orf66Q9H5L9 145 aa10.77□□□□□ -0.69
TSPAN4-220ENST00000532375 DBX1A6NMT0 343 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 DISC1C4P0D8 188 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 ACTL6BO94805 426 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 CRYGCP07315 174 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 P0C879 139 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 CD33P20138 364 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 G6PCP35575 357 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 TPPP2P59282 170 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 SURF2Q15527 256 aaPredicted RBP10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 C19orf35Q6ZS72 473 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 DMBX1Q8NFW5 382 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 ZFAND1Q8TCF1 268 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 PHB2Q99623 299 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 HRASLSQ9HDD0 168 aa10.76□□□□□ -0.69
TSPAN4-220ENST00000532375 TEX50A0A1B0GTY4 177 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 IGLC7A0M8Q6 106 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 H0Y980 276 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 PRH1P02810 166 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 AREGP15514 252 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 CTRB1P17538 263 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 DEFA5Q01523 94 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 DEFA6Q01524 100 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 BAK1Q16611 211 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 CTRB2Q6GPI1 263 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 GDPD1Q8N9F7 314 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 TMEM230Q96A57 120 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 FANCD2OSQ96PS1 177 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 FYTTD1Q96QD9 318 aaKnown RBP10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 PRRT1Q99946 306 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 COA4Q9NYJ1 87 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 NSG2Q9Y328 171 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 DMRT1Q9Y5R6 373 aa10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 PRKDCP78527 4128 aaKnown RBP10.75□□□□□ -0.69
TSPAN4-220ENST00000532375 IGHV4OR15-8A0A075B7B6 117 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 A0A087WW49 117 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 C3orf85A0A1B0GTC6 90 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 UCP1P25874 307 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 PSMB6P28072 239 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 S100GP29377 79 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 CD40LGP29965 261 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 ECI1P42126 302 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 ZNF616Q08AN1 781 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 SP6Q3SY56 376 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 ZNF343Q6P1L6 599 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 OR10W1Q8NGF6 305 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 GLYATL2Q8WU03 294 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 RCC1LQ96I51 464 aaKnown RBP10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 NDUFA4L2Q9NRX3 87 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 ZNF355PQ9NSJ1 428 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
TSPAN4-220ENST00000532375 WIPF1O43516 503 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 HSPB1P04792 205 aaKnown RBP10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 ERVK-16P61578 105 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 IZUMO4Q1ZYL8 232 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 SPANXN2Q5MJ10 180 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 LHFPL5Q8TAF8 219 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 SRSF8Q9BRL6 282 aaKnown RBP10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 TMEM14BQ9NUH8 114 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 COPZ2Q9P299 210 aa10.73□□□□□ -0.69
TSPAN4-220ENST00000532375 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 CRYM-AS1A6NIL9 109 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 DUS4LO95620 317 aaKnown RBP10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 CDS2O95674 445 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 SERPINE2P07093 398 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 SUPT4H1P63272 117 aaKnown RBP10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 RHOGP84095 191 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 WT1-ASQ06250 92 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 SLC25A42Q86VD7 318 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 TOMM5Q8N4H5 51 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms