RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 DHFRP00374 187 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 EGR2P11161 476 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-211ENST00000531041 PROK1P58294 105 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 STPG2Q8N412 459 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 OR4A16Q8NH70 328 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 SGMS2Q8NHU3 365 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 ZNF431Q8TF32 576 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-211ENST00000531041 SRSF12Q8WXF0 261 aaKnown RBP13.33□□□□□ -0.28
SF3B2-211ENST00000531041 NOL4LQ96MY1 436 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-211ENST00000531041 SEC22CQ9BRL7 303 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 TMEM14BQ9NUH8 114 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 FKBP11Q9NYL4 201 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 NSG2Q9Y328 171 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 FBXO7Q9Y3I1 522 aa13.33□□□□□ -0.28
SF3B2-211ENST00000531041 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 IZUMO4Q1ZYL8 232 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 AWAT1Q58HT5 328 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 NMSQ5H8A3 153 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 CHPT1Q8WUD6 406 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 PHB2Q99623 299 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 GON7Q9BXV9 100 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 GPN1Q9HCN4 374 aaPredicted RBP13.32□□□□□ -0.28
SF3B2-211ENST00000531041 LINC00527Q9UJ94 153 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 FOXA2Q9Y261 457 aaPredicted RBP13.32□□□□□ -0.28
SF3B2-211ENST00000531041 TMED3Q9Y3Q3 217 aa13.32□□□□□ -0.28
SF3B2-211ENST00000531041 A0A0B4J293 547 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 E7EUB6 86 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
SF3B2-211ENST00000531041 TMEM267Q0VDI3 215 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-211ENST00000531041 KRTAP21-3Q3LHN1 58 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 AKIRIN2Q53H80 203 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 C19orf54Q5BKX5 351 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 C10orf55Q5SWW7 151 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 Q6ZRM9 215 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 ZNF429Q86V71 674 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 GRPEL2Q8TAA5 225 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 SPIN2AQ99865 258 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 SPIN2BQ9BPZ2 258 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
SF3B2-211ENST00000531041 ZNF257Q9Y2Q1 563 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 COL6A5A8TX70 2615 aa13.31□□□□□ -0.28
SF3B2-211ENST00000531041 TEX50A0A1B0GTY4 177 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 MSGN1A6NI15 193 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 DBX1A6NMT0 343 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 SNRPGP15A8MWD9 76 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 MYOD1P15172 320 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 OR2B8PP59922 312 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 OXA1LQ15070 435 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 CENPVQ7Z7K6 275 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-211ENST00000531041 KLHDC1Q8N7A1 406 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 OR1L8Q8NGR8 309 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 OR5B3Q8NH48 314 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 WIPF2Q8TF74 440 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-211ENST00000531041 TMEM68Q96MH6 324 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 OR51B2Q9Y5P1 312 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 WSB1Q9Y6I7 421 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 CGB1A6NKQ9 187 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 RBMXL2O75526 392 aaKnown RBP13.3□□□□□ -0.28
SF3B2-211ENST00000531041 HOXB5P09067 269 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 SULT1A3P0DMM9 295 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 SULT1A4P0DMN0 295 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 CFHR3Q02985 330 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 AARDQ4LEZ3 155 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 C12orf45Q8N5I9 185 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-211ENST00000531041 LFNGQ8NES3 379 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-211ENST00000531041 COA4Q9NYJ1 87 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 CACNG5Q9UF02 275 aa13.3□□□□□ -0.28
SF3B2-211ENST00000531041 TENM1Q9UKZ4 2725 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 A0A1B0GU03 582 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 A0A1B0GW64 132 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 PSMB11A5LHX3 300 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 TEX22C9J3V5 150 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 G3V318 75 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 HAX1O00165 279 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 OPN1MWP04001 364 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 OPN1MW2P0DN77 364 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 OPN1MW3P0DN78 364 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 SLC25A6P12236 298 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 PPIFP30405 207 aaKnown RBP13.29□□□□□ -0.28
SF3B2-211ENST00000531041 HSPE1P61604 102 aaKnown RBP13.29□□□□□ -0.28
SF3B2-211ENST00000531041 SLC35B1P78383 322 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 SMCO1Q147U7 214 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 ECSCRQ19T08 205 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 GGNBP1Q5YKI7 109 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 THOC7Q6I9Y2 204 aaKnown RBP13.29□□□□□ -0.28
SF3B2-211ENST00000531041 UNQ5815/PRO19632Q6UWF5 114 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 MINDY2Q8NBR6 621 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 SRSF8Q9BRL6 282 aaKnown RBP13.29□□□□□ -0.28
SF3B2-211ENST00000531041 QTRT1Q9BXR0 403 aaKnown RBP13.29□□□□□ -0.28
SF3B2-211ENST00000531041 NDUFA4L2Q9NRX3 87 aa13.29□□□□□ -0.28
SF3B2-211ENST00000531041 C7orf66A4D0T2 115 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 ST8SIA3O43173 380 aa13.28□□□□□ -0.28
SF3B2-211ENST00000531041 ADAP1O75689 374 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms