RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 TRAV41A0A0B4J266 112 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 GAGE12JA6NER3 117 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 FAM90A27PA6NNH2 459 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 FOXI3A8MTJ6 420 aaPredicted RBP6.21□□□□□ -1.42
CTNND1-229ENST00000531014 FXYD1O00168 92 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 ZNHIT1O43257 154 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 SERF1AO75920 110 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 RPL8P62917 257 aaKnown RBP6.21□□□□□ -1.42
CTNND1-229ENST00000531014 GAGE1Q13065 139 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 GAGE4Q13068 117 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 GAGE5Q13069 117 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 GAGE6Q13070 117 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 BOD1L2Q8IYS8 172 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 MARS2Q96GW9 593 aaKnown RBP6.21□□□□□ -1.42
CTNND1-229ENST00000531014 TMEM126AQ9H061 195 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 MYH7P12883 1935 aa6.21□□□□□ -1.42
CTNND1-229ENST00000531014 MYH6P13533 1939 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 CDIPTO14735 213 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 IGKCP01834 107 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 CD3EP07766 207 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 GCHFRP30047 84 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ZP1P60852 638 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 WIPI1Q5MNZ9 446 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-229ENST00000531014 DCAF12L2Q5VW00 463 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 CLDND2Q8NHS1 167 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ASB10Q8WXI3 467 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 TMEM222Q9H0R3 208 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 SMPXQ9UHP9 88 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 MRM2Q9UI43 246 aaKnown RBP6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ARID1AO14497 2285 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 MYH7BA7E2Y1 1941 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 MGAMO43451 1857 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 A0A087WWC5 75 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 H3BMM0 161 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 NTN1O95631 604 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 GZMBP10144 247 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 IFITM1P13164 125 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 CTLA4P16410 223 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 LINC00158P58513 81 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ZNF818PQ6ZRF7 136 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 MRPL55Q7Z7F7 128 aaKnown RBP6.2□□□□□ -1.42
CTNND1-229ENST00000531014 GATAD1Q8WUU5 269 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 GTF3AQ92664 365 aaKnown RBP6.2□□□□□ -1.42
CTNND1-229ENST00000531014 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 COQ2Q96H96 371 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 IGKV3D-20A0A0C4DH25 116 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 IGLV3-19P01714 112 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ZGLP1P0C6A0 271 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 INAFM2P0DMQ5 153 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 WDR82Q6UXN9 313 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 CYP2G1PQ6ZSU1 146 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ATP6V0BQ99437 205 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 FBXL15Q9H469 300 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 CHTOPQ9Y3Y2 248 aaKnown RBP6.2□□□□□ -1.42
CTNND1-229ENST00000531014 SCN10AQ9Y5Y9 1956 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 IZUMO1RA6ND01 250 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 C9orf172C9J069 976 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 PLPP3O14495 311 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 TNFSF13O75888 250 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ZNF205O95201 554 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 HCP5Q6MZN7 132 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 TMEM91Q6ZNR0 172 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 FGF22Q9HCT0 170 aa6.2□□□□□ -1.42
CTNND1-229ENST00000531014 GAGE12BA1L429 117 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 MGST3O14880 152 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 NPPCP23582 126 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 GLRXP35754 106 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 SRSF1Q07955 248 aaKnown RBP eCLIP6.19□□□□□ -1.421e-7■□□□□ 10.7
CTNND1-229ENST00000531014 NHLRC3Q5JS37 347 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 TMEM42Q69YG0 159 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 ASPHD2Q6ICH7 369 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 TMEM170AQ8WVE7 144 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 GNRHR2Q96P88 292 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 RPP21Q9H633 154 aaKnown RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 SEMA5BQ9P283 1151 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 EDIL3O43854 480 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 CD5LO43866 347 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 FAM106CPP0CH98 169 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 VSIG8P0DPA2 414 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 LSM6P62312 80 aaKnown RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 ZNF146Q15072 292 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 CIARTQ8N365 385 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 CNRIP1Q96F85 164 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 ZNF625Q96I27 306 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 ZNF488Q96MN9 340 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 OTOFQ9HC10 1997 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 REG1BP48304 166 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 ORMDL2Q53FV1 153 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 UNQ5815/PRO19632Q6UWF5 114 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 ADAMTSL5Q6ZMM2 481 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 BCL6BQ8N143 479 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 SF3B6Q9Y3B4 125 aaKnown RBP6.19□□□□□ -1.42
CTNND1-229ENST00000531014 A0A0G2JMZ2 1700 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 LRRC37A2A6NM11 1700 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
CTNND1-229ENST00000531014 A0A1W2PQF6 199 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms