RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 LINC00312Q9Y6C7 94 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 NPIPB9F8W1W9 429 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 HLA-DRB1P01911 266 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 LHX2P50458 406 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 TFF3Q07654 80 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 OR13A1Q8NGR1 328 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 CLDND2Q8NHS1 167 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 TMEM101Q96IK0 257 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 RTBDNQ9BSG5 229 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 NUMA1Q14980 2115 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 C7orf71A4D174 169 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 VENTXO95231 258 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 HINT1P49773 126 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 C1QL2Q7Z5L3 287 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 OR4D5Q8NGN0 318 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 GATAD1Q8WUU5 269 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 C18orf12Q96KH6 178 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 KIR2DL4Q99706 377 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 DPM3Q9P2X0 92 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 UQCR10Q9UDW1 63 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 FBXL7Q9UJT9 491 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 IGFBP3P17936 291 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 C12orf54Q6X4T0 127 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 AICDAQ9GZX7 198 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 A0A0G2JLM5 398 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 ZNF815PA8K554 130 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 MPTX1A8MV57 137 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 SIGLEC5O15389 551 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 TCF21O43680 179 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 PPP1R17O96001 155 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 C2orf68Q2NKX9 166 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 FAM74A4Q5TZK3 123 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 RNASEH2CQ8TDP1 164 aaKnown RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 ABHD17AQ96GS6 310 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 IMMP1LQ96LU5 166 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 SGK494Q96LW2 274 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 A1L4Q6 167 aa7.15□□□□□ -1.26
CTNND1-227ENST00000530748 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-227ENST00000530748 IGHV3-66A0A0C4DH42 116 aa7.15□□□□□ -1.26
CTNND1-227ENST00000530748 PAX1P15863 534 aa7.15□□□□□ -1.26
CTNND1-227ENST00000530748 IGFBP2P18065 325 aa7.15□□□□□ -1.26
CTNND1-227ENST00000530748 C9orf106Q8NAJ2 232 aa7.15□□□□□ -1.26
CTNND1-227ENST00000530748 C17orf98A8MV24 154 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 OR11H4Q8NGC9 324 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 FBXL15Q9H469 300 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 PEMTQ9UBM1 199 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 A0A0G2JK05 382 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 H7C1H1 209 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 NUTF2P61970 127 aaKnown RBP7.15□□□□□ -1.27
CTNND1-227ENST00000530748 MEIG1Q5JSS6 88 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 FAM216BQ8N7L0 139 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 MRAP2Q96G30 205 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 IL36BQ9NZH7 164 aa7.15□□□□□ -1.27
CTNND1-227ENST00000530748 GAGE10A6NGK3 116 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 RRHO14718 337 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 LEPP41159 167 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 ICAM4Q14773 271 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 PAPPA-AS1Q5QFB9 102 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 TMEM105Q8N8V8 129 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 REPIN1Q9BWE0 567 aaKnown RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 CEACAM4O75871 244 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 CELA3BP08861 270 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 CFHR1Q03591 330 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 ZIC4Q8N9L1 334 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 RNASE6Q93091 150 aaKnown RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 CBLN4Q9NTU7 201 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 PTPRFP10586 1907 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 IGLV3-12A0A075B6K2 115 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 IGLV3-32A0A0A0MS00 114 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 LOC107984156A0A0G2JMH3 177 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 PEX7O00628 323 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 EFEMP2O95967 443 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 VDAC2P45880 294 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 TAS2R60P59551 318 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 ZP1P60852 638 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 OR4X2Q8NGF9 303 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 PDCD11Q14690 1871 aaKnown RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 LOC102723996A0A087X1L8 192 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 A0A1B0GW15 77 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 C17orf100A8MU93 164 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 EFNB1P98172 346 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 SOX21Q9Y651 276 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-227ENST00000530748 SAMD13Q5VXD3 122 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 FLVCR1-AS1Q8TAF5 88 aa7.14□□□□□ -1.27
CTNND1-227ENST00000530748 CGAP01215 116 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 PRSS2P07478 247 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 GPX4P36969 197 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms