RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 TMEM106BQ9NUM4 274 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 FOXI3A8MTJ6 420 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-223ENST00000529986 CXCL1P09341 107 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 SPAG8Q99932 426 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-223ENST00000529986 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 HEXA-AS1Q9H8Q6 139 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 CABIN1Q9Y6J0 2220 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 PPIAL4EA0A075B759 164 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 PPIAL4FP0DN26 164 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 GATA2P23769 480 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-223ENST00000529986 MEF2CQ06413 473 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-223ENST00000529986 ITLN1Q8WWA0 313 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 PPIAL4AQ9Y536 164 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 S4R3C0 116 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 IGFBP2P18065 325 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 TRIP6Q15654 476 aaKnown RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 TBR1Q16650 682 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 LY6G6FQ5SQ64 297 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 INO80CQ6PI98 192 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 C1QL4Q86Z23 238 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 UBE2L6O14933 153 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 PRB4P10163 310 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 ID1P41134 155 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 CKS1BP61024 79 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 RPL39P5Q59GN2 51 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 GATAD1Q8WUU5 269 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 METTL26Q96S19 204 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 VCX2Q9H322 139 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 TUBA4BQ9H853 241 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 CALYQ9NYX4 217 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 TMEM56-RWDD3S4R434 201 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 SEC16AO15027 2179 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 A0A1W2PRS3 328 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 ODAMA1E959 279 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 COLCA2A8K830 154 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 NPIPB6E9PJ23 425 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 H0YIZ8 118 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF318Q5VUA4 2279 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV5-10-1A0A0J9YXX1 117 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 DNAL4O96015 105 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 C19orf48Q6RUI8 117 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 PCSK4Q6UW60 755 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 HEPN1Q6WQI6 88 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 SP7Q8TDD2 431 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 SIGMAR1Q99720 223 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 PILRAQ9UKJ1 303 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 ALPK2Q86TB3 2170 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 CIRBPQ14011 172 aaKnown RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF56Q15929 161 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 C5orf30Q96GV9 206 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 TTTY12Q9BZ98 90 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 ELOVL5Q9NYP7 299 aa6.49□□□□□ -1.37
CTNND1-223ENST00000529986 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 PTPRZ1P23471 2315 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-223ENST00000529986 TRAV24A0A0B4J272 114 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 NUTF2P61970 127 aaKnown RBP6.48□□□□□ -1.37
CTNND1-223ENST00000529986 EGR4Q05215 589 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 UNQ5815/PRO19632Q6UWF5 114 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 MIR17HGQ75NE6 70 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 ASCL5Q7RTU5 278 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 OR5A1Q8NGJ0 315 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 DYNLRB2Q8TF09 96 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF638Q14966 1978 aaKnown RBP6.48□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV3-66A0A0C4DH42 116 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 SS18L1O75177 396 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-223ENST00000529986 AMBPP02760 352 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 CA7P43166 264 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF658BQ4V348 819 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-223ENST00000529986 NEUROG1Q92886 237 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 CACNA1IQ9P0X4 2223 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV3-49A0A0A0MS15 119 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 TRAV12-3A0A0B4J271 114 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV3-23P01764 117 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV4-39P01824 125 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 GPX1P07203 203 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 IL9P15248 144 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 C1orf185Q5T7R7 199 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 SYT8Q8NBV8 401 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
CTNND1-223ENST00000529986 OTOFQ9HC10 1997 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 HIGD1CA8MV81 97 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 M0R381 172 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 DLEU1O43261 78 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 RPS20P60866 119 aaKnown RBP6.48□□□□□ -1.37
CTNND1-223ENST00000529986 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 PSME4Q14997 1843 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 PIKFYVEQ9Y2I7 2098 aa6.48□□□□□ -1.37
CTNND1-223ENST00000529986 TMEM50AO95807 157 aa6.47□□□□□ -1.37
CTNND1-223ENST00000529986 BRCA1P38398 1863 aaKnown RBP6.47□□□□□ -1.37
CTNND1-223ENST00000529986 WDR82Q6UXN9 313 aa6.47□□□□□ -1.37
CTNND1-223ENST00000529986 PRDM14Q9GZV8 571 aa6.47□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF257Q9Y2Q1 563 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms