RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 VDAC1P21796 283 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 MAS1LP35410 378 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 AKR1C2P52895 323 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 CRIP2P52943 208 aaPredicted RBP10.99□□□□□ -0.65
USF1-209ENST00000529476 DEFA1P59665 94 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 DEFA3P59666 94 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 UBE2MP61081 183 aaKnown RBP10.99□□□□□ -0.65
USF1-209ENST00000529476 CFHR3Q02985 330 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 UNQ5815/PRO19632Q6UWF5 114 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 CADM3Q8N126 398 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 LFNGQ8NES3 379 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 ENKURQ8TC29 256 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 CASTOR1Q8WTX7 329 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 RBPMSQ93062 196 aaKnown RBP10.99□□□□□ -0.65
USF1-209ENST00000529476 NUBP2Q9Y5Y2 271 aa10.99□□□□□ -0.65
USF1-209ENST00000529476 A0A0G2JRQ6 117 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 E7EUB6 86 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 SNAPC5O75971 98 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 ATG12O94817 140 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 H2AFB2P0C5Z0 115 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 OR4E1P0C645 316 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 APELAP0DMC3 54 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 CD28P10747 220 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
USF1-209ENST00000529476 OR2B8PP59922 312 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 SLC35B1P78383 322 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 ANKRD55Q3KP44 614 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 TCTEX1D4Q5JR98 221 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 ASPHD1Q5U4P2 390 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 LGI3Q8N145 548 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 RNASE11Q8TAA1 199 aaKnown RBP10.98□□□□□ -0.65
USF1-209ENST00000529476 PHB2Q99623 299 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 CITED1Q99966 193 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 GON7Q9BXV9 100 aa10.98□□□□□ -0.65
USF1-209ENST00000529476 A0A1B0GW64 132 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 A0A1W2PN81 502 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 CGB1A6NKQ9 187 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 DBX1A6NMT0 343 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 FBXO24O75426 580 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
USF1-209ENST00000529476 PPIFP30405 207 aaKnown RBP10.97□□□□□ -0.65
USF1-209ENST00000529476 CHRNA7P36544 502 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 RAB25P57735 213 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 SRPXP78539 464 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 TMEM267Q0VDI3 215 aaPredicted RBP10.97□□□□□ -0.65
USF1-209ENST00000529476 DHRS2Q13268 280 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 C4orf46Q504U0 113 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 AKIRIN2Q53H80 203 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 LYG2Q86SG7 212 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 SLC35G3Q8N808 338 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 MINDY2Q8NBR6 621 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 IL22RA2Q969J5 263 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 RRNAD1Q96FB5 475 aaKnown RBP10.97□□□□□ -0.65
USF1-209ENST00000529476 FYTTD1Q96QD9 318 aaKnown RBP10.97□□□□□ -0.65
USF1-209ENST00000529476 COMMD5Q9GZQ3 224 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 PRNDQ9UKY0 176 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 OR51B2Q9Y5P1 312 aa10.97□□□□□ -0.65
USF1-209ENST00000529476 A0A0B4J293 547 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 TEX50A0A1B0GTY4 177 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 HMX3A6NHT5 357 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 C15orf61A6NNL5 157 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 TEX22C9J3V5 150 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 SOX15O60248 233 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 IGHG4P01861 327 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 FGF2P09038 288 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 SHISA2Q6UWI4 295 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 LCNL1Q6ZST4 164 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 LYZL2Q7Z4W2 148 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 DUSP18Q8NEJ0 188 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 OR5T1Q8NG75 326 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 OR4X2Q8NGF9 303 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 OR52B4Q8NGK2 314 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 OR4A16Q8NH70 328 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 GPR146Q96CH1 333 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 SPIN2AQ99865 258 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 SPIN2BQ9BPZ2 258 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 QTRT1Q9BXR0 403 aaKnown RBP10.96□□□□□ -0.65
USF1-209ENST00000529476 ALX4Q9H161 411 aaPredicted RBP10.96□□□□□ -0.65
USF1-209ENST00000529476 TMEM14BQ9NUH8 114 aa10.96□□□□□ -0.65
USF1-209ENST00000529476 FOXA2Q9Y261 457 aaPredicted RBP10.96□□□□□ -0.65
USF1-209ENST00000529476 A0A0B4J2A0 478 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
USF1-209ENST00000529476 IGLV1-40P01703 118 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 SPNP16150 400 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 MECP2P51608 486 aaKnown RBP10.95□□□□□ -0.66
USF1-209ENST00000529476 CD83Q01151 205 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 Q6ZRM9 215 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 FAM219AQ8IW50 185 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 LRTM2Q8N967 370 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 LSM10Q969L4 123 aaKnown RBP10.95□□□□□ -0.66
USF1-209ENST00000529476 CITED2Q99967 270 aaPredicted RBP10.95□□□□□ -0.66
USF1-209ENST00000529476 SEC22CQ9BRL7 303 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 SHPKQ9UHJ6 478 aa10.95□□□□□ -0.66
USF1-209ENST00000529476 DUS4LO95620 317 aaKnown RBP10.94□□□□□ -0.66
USF1-209ENST00000529476 RPLP1P05386 114 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms