RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PRAMEF5Q5TYX0 476 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 PRAMEF6Q5VXH4 476 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 CPT1CQ8TCG5 803 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 PMCHL2Q9BQD1 86 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
TSKU-203ENST00000527881 GJE1A6NN92 205 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 C15orf62A8K5M9 175 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 RHBDL1O75783 438 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 MRPL49Q13405 166 aaKnown RBP10.42□□□□□ -0.74
TSKU-203ENST00000527881 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 OR1B1Q8NGR6 318 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 C9JCJ5 164 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 REG1AP05451 166 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
TSKU-203ENST00000527881 FAM71F2Q6NXP2 309 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 TRAT1Q6PIZ9 186 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 GTF2H5Q6ZYL4 71 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 TRIB1Q96RU8 372 aa10.42□□□□□ -0.74
TSKU-203ENST00000527881 TRGV10A0A0A0MS01 117 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 OR10J4P0C629 311 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 OPRK1P41145 380 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
TSKU-203ENST00000527881 RAB31Q13636 194 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 WDR74Q6RFH5 385 aaPredicted RBP10.41□□□□□ -0.74
TSKU-203ENST00000527881 OR1N2Q8NGR9 330 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 OR4A16Q8NH70 328 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 MGST2Q99735 147 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 GGTLC1Q9BX51 225 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 ZNF355PQ9NSJ1 428 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 DOCK7Q96N67 2140 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 DEFB108AA8MXU0 73 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 RPL24P83731 157 aaKnown RBP10.41□□□□□ -0.74
TSKU-203ENST00000527881 ZNF718Q3SXZ3 478 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 SAMD13Q5VXD3 122 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 IGHV3-43A0A0B4J1X8 118 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 CER1O95813 267 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 IGHV3-43DP0DP04 118 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 NTF4P34130 210 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 PAX2Q02962 417 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 ABHD12Q8N2K0 398 aa10.41□□□□□ -0.74
TSKU-203ENST00000527881 MPDU1O75352 247 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 NGFP01138 241 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 PPOXP50336 477 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 EFNB3Q15768 340 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 ZNF296Q8WUU4 475 aaPredicted RBP10.4□□□□□ -0.74
TSKU-203ENST00000527881 GALMQ96C23 342 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 TNFRSF19Q9NS68 423 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 IGLV3-32A0A0A0MS00 114 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 ZIC3O60481 467 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 CELA2AP08217 269 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 CCL3P10147 92 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 TCTAP57738 103 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 SPATA46Q5T0L3 261 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 SPACA3Q8IXA5 215 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 TMEM251Q8N6I4 163 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 STPG3Q8N7X2 389 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
TSKU-203ENST00000527881 HSD17B10Q99714 261 aaKnown RBP10.4□□□□□ -0.74
TSKU-203ENST00000527881 OSTCQ9NRP0 149 aa10.4□□□□□ -0.74
TSKU-203ENST00000527881 IGHV1OR21-1A0A087WYE8 117 aa10.4□□□□□ -0.75
TSKU-203ENST00000527881 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.4□□□□□ -0.75
TSKU-203ENST00000527881 HAND1O96004 215 aa10.4□□□□□ -0.75
TSKU-203ENST00000527881 RFESDQ8TAC1 157 aa10.4□□□□□ -0.75
TSKU-203ENST00000527881 TMEM186Q96B77 213 aa10.4□□□□□ -0.75
TSKU-203ENST00000527881 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.75
TSKU-203ENST00000527881 A0A1W2PPC4 97 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 CD5LO43866 347 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 OR2H2O95918 312 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 NBEAP1P0C6P0 100 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 GNG3P63215 75 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 TBR1Q16650 682 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 MIR17HGQ75NE6 70 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 SPATA12Q7Z6I5 190 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 FAM216AQ8WUB2 273 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 TNFRSF14Q92956 283 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 SH2D2AQ9NP31 389 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 FER1L5A0AVI2 2057 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 FAM231BA6NCW3 169 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 IZUMO1RA6ND01 250 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 TRIP6Q15654 476 aaKnown RBP10.39□□□□□ -0.75
TSKU-203ENST00000527881 VWC2Q2TAL6 325 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 LHFPL4Q7Z7J7 247 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 VKORC1L1Q8N0U8 176 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 RAB37Q96AX2 223 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 CEBPDP49716 269 aaPredicted RBP10.39□□□□□ -0.75
TSKU-203ENST00000527881 TRIM61Q5EBN2 209 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 FADS6Q8N9I5 356 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 C1QTNF5Q9BXJ0 243 aa10.39□□□□□ -0.75
TSKU-203ENST00000527881 CHCHD2Q9Y6H1 151 aaPredicted RBP10.39□□□□□ -0.75
TSKU-203ENST00000527881 H3BUT2 72 aa10.38□□□□□ -0.75
TSKU-203ENST00000527881 FCGR3BO75015 233 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms