RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PMCHP20382 165 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 GATA2P23769 480 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 VDAC2P45880 294 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 NDUFV3P56181 108 aaKnown RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CLDN6P56747 220 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 RPL27P61353 136 aaKnown RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 TNFAIP6P98066 277 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 PSG4Q00888 419 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CFHR3Q02985 330 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 MRPL23Q16540 153 aaKnown RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 MS4A18Q3C1V0 323 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 POM121L1PQ3SYA9 428 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 FAM106AQ4KMX7 169 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 STPG1Q5TH74 334 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ACSM2BQ68CK6 577 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 SIGLEC15Q6ZMC9 328 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 STAC2Q6ZMT1 411 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF793Q6ZN11 406 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 RFLNAQ6ZTI6 216 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 FAM19A5Q7Z5A7 132 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 SPATA12Q7Z6I5 190 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 PPP1R27Q86WC6 154 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ZDHHC23Q8IYP9 409 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CLECL1Q8IZS7 167 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 C8orf31Q8N9H6 132 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 OR2M3Q8NG83 312 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 OR51A4Q8NGJ6 313 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 OR5D14Q8NGL3 314 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 OR13A1Q8NGR1 328 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 RNF128Q8TEB7 428 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 RTN4IP1Q8WWV3 396 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 LSM10Q969L4 123 aaKnown RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ATP5SQ99766 215 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 VGLL1Q99990 258 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 SMIM7Q9BQ49 75 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CLEC7AQ9BXN2 247 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 SH3BGRL3Q9H299 93 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 SCRT2Q9NQ03 307 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 RABAC1Q9UI14 185 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ABT1Q9ULW3 272 aaKnown RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 INSL5Q9Y5Q6 135 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 HEBP2Q9Y5Z4 205 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 SOX21Q9Y651 276 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 KIAA2026Q5HYC2 2103 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A087WV48 116 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TRBV5-7A0A0A0MS05 114 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 IGKV6D-41A0A0C4DH26 115 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TRBV5-5A0A0J9YX44 114 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PRD5 423 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PRF3 423 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PRM7 423 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PS18 150 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 GRIFINA4D1Z8 144 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 NPIPB13A6NJU9 1138 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 LRRC30A6NM36 301 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 NPIPB4C9JG80 1138 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM262E9PQX1 116 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 SYS1-DBNDD2H3BUS1 97 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 CRXO43186 299 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TIMM8AO60220 97 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 HPNP05981 417 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 CSN3P07498 182 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 SP1P08047 785 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 ATP1B2P14415 290 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 RPL7P18124 248 aaKnown RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 NTF3P20783 257 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 FCGR2BP31994 310 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 G6PCP35575 357 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 DAP3P51398 398 aaKnown RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 FUT6P51993 359 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 XGP55808 180 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 UBE2G1P62253 170 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 RPL36AP83881 106 aaKnown RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TGFBR3Q03167 851 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 ATP5G2Q06055 141 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 CCL15Q16663 113 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 RPEL1Q2QD12 228 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 MEIG1Q5JSS6 88 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 NOXRED1Q6NXP6 359 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 SLC25A47Q6Q0C1 308 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 ASCL5Q7RTU5 278 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 FBXL14Q8N1E6 418 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF433Q8N7K0 673 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TPRX1Q8N7U7 411 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM178AQ8NBL3 297 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 OR10G7Q8NGN6 311 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 RNF138Q8WVD3 245 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM171Q8WVE6 324 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 OR5P3Q8WZ94 311 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM230Q96A57 120 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 C10orf35Q96D05 121 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 MSI2Q96DH6 328 aaKnown RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 MMABQ96EY8 250 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 PELI1Q96FA3 418 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 SGK494Q96LW2 274 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 RAB40CQ96S21 281 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 AMELYQ99218 206 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 SPANXDQ9BXN6 97 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 HRASLS2Q9NWW9 162 aa3.04□□□□□ -1.92
CLNS1A-209ENST00000527299 KLK13Q9UKR3 277 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms