RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 REC114Q7Z4M0 266 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 CADM3Q8N126 398 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 TTC9CQ8N5M4 171 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 FYTTD1Q96QD9 318 aaKnown RBP11.16□□□□□ -0.62
NXF1-204ENST00000527064 PRRT1Q99946 306 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 COMMD5Q9GZQ3 224 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 COPZ2Q9P299 210 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 ZNF257Q9Y2Q1 563 aa11.16□□□□□ -0.62
NXF1-204ENST00000527064 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 TEX22C9J3V5 150 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 KRASP01116 189 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 HSPB1P04792 205 aaKnown RBP11.15□□□□□ -0.62
NXF1-204ENST00000527064 SERPINE2P07093 398 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 RPA2P15927 270 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 AP3S2P59780 193 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 SURF2Q15527 256 aaPredicted RBP11.15□□□□□ -0.62
NXF1-204ENST00000527064 ZNF585BQ52M93 769 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 PYDC2Q56P42 97 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 SPANXN2Q5MJ10 180 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 FAAP20Q6NZ36 180 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 OR4C16Q8NGL9 310 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 OR13C8Q8NGS7 320 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 TSC22D3Q99576 134 aa11.15□□□□□ -0.62
NXF1-204ENST00000527064 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
NXF1-204ENST00000527064 ALX4Q9H161 411 aaPredicted RBP11.15□□□□□ -0.62
NXF1-204ENST00000527064 C14orf166Q9Y224 244 aaKnown RBP11.15□□□□□ -0.62
NXF1-204ENST00000527064 HMX3A6NHT5 357 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 H0Y980 276 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 B3GALNT1O75752 331 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 SNAPC5O75971 98 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
NXF1-204ENST00000527064 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
NXF1-204ENST00000527064 FAUP35544 74 aaKnown RBP11.14□□□□□ -0.63
NXF1-204ENST00000527064 G6PCP35575 357 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 FOXB2Q5VYV0 432 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 Q8N402 240 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 THAP7Q9BT49 309 aaPredicted RBP11.14□□□□□ -0.63
NXF1-204ENST00000527064 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
NXF1-204ENST00000527064 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
NXF1-204ENST00000527064 SCP2D1Q9UJQ7 156 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 V9GYH0 126 aa11.14□□□□□ -0.63
NXF1-204ENST00000527064 IGHV4OR15-8A0A075B7B6 117 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 A0A087WW49 117 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 ATG12O94817 140 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 PI3P19957 117 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 PSMB6P28072 239 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 OR2B8PP59922 312 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 RHOGP84095 191 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 C9orf66Q5T8R8 295 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
NXF1-204ENST00000527064 CCDC190Q86UF4 302 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 NECAP1Q8NC96 275 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 MARCH1Q8TCQ1 289 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 RANGRFQ9HD47 186 aaPredicted RBP11.13□□□□□ -0.63
NXF1-204ENST00000527064 SLC2A8Q9NY64 477 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
NXF1-204ENST00000527064 NOTCH1P46531 2555 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 TRBV9A0A0B4J1U6 114 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 C3orf85A0A1B0GTC6 90 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 CYB5BO43169 146 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 CRYGCP07315 174 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 DEFA4P12838 97 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
NXF1-204ENST00000527064 ZP3P21754 424 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 ETV6P41212 452 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 PDLIM3Q53GG5 364 aaPredicted RBP11.12□□□□□ -0.63
NXF1-204ENST00000527064 H2BFWTQ7Z2G1 175 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 TOMM5Q8N4H5 51 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 OR51S1Q8NGJ8 323 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 DEDD2Q8WXF8 326 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 MCUBQ9NWR8 336 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 OR51B2Q9Y5P1 312 aa11.12□□□□□ -0.63
NXF1-204ENST00000527064 A0A1B0GW64 132 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 E7EUB6 86 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 OVOL1O14753 267 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 WIPF1O43516 503 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 PRH1P02810 166 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 TRAPPC2P0DI81 140 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 TRAPPC2BP0DI82 140 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 AREGP15514 252 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 CTRB1P17538 263 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 SLURP1P55000 103 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 ZNF45Q02386 682 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 EGFEM1PQ0D2K5 195 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
NXF1-204ENST00000527064 ZNF79Q15937 498 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 CTRB2Q6GPI1 263 aa11.11□□□□□ -0.63
NXF1-204ENST00000527064 ZNF343Q6P1L6 599 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms