RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 TEX45Q8NA69 505 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 SGMS2Q8NHU3 365 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 EAF1Q96JC9 268 aaPredicted RBP10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 FKBP11Q9NYL4 201 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 KIAA1456Q9P272 454 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 PRNDQ9UKY0 176 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 SLC25A17O43808 307 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 MED6O75586 246 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 KBTBD11O94819 623 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 SPDEFO95238 335 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 IGLV2-23P01705 113 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 MBPP02686 304 aaPredicted RBP10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 TMEM11P17152 192 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 PVALBP20472 110 aaPredicted RBP10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 MDKP21741 143 aaPredicted RBP10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 CD24P25063 80 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 IER3P46695 156 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 HNF4GQ14541 408 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 PSG5Q15238 335 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 CXorf66Q5JRM2 361 aaPredicted RBP10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 NOXA1Q86UR1 476 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 FOXRED2Q8IWF2 684 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 RBMXL1Q96E39 390 aaKnown RBP10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 RITA1Q96K30 269 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 HYLS1Q96M11 299 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 TNFRSF19Q9NS68 423 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 POMT1Q9Y6A1 747 aa10.12□□□□□ -0.79
SSSCA1-203ENST00000526877 TRAV3A0A0B4J244 114 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 K7EPK0 472 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 NBR2O15453 112 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 IFNA17P01571 189 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 IL6RP08887 468 aaPredicted RBP10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 SLC25A4P12235 298 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 ID3Q02535 119 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 PLGLAQ15195 96 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 MMDQ15546 238 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 AANATQ16613 207 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 LRRC75BQ2VPJ9 315 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 Q5BKY6 102 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 C11orf87Q6NUJ2 197 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 PRSS54Q6PEW0 395 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 FAM71E2Q8N5Q1 922 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 NPBQ8NG41 125 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 OR8H1Q8NGG4 311 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 TMEM167AQ8TBQ9 72 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 SSMEM1Q8WWF3 244 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 SSX3Q99909 188 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 METTL1Q9UBP6 276 aaKnown RBP10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 NSG2Q9Y328 171 aa10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 TET2Q6N021 2002 aaPredicted RBP10.11□□□□□ -0.79
SSSCA1-203ENST00000526877 FXYD6-FXYD2A0A087WZ82 144 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 TRAV14DV4A0A0A6YYC5 116 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 NCBP2LA6PVI3 153 aaKnown RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 BOLA2-SMG1P6H3BVE0 249 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 L7N2F9 121 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 RRHO14718 337 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 DEDDO75618 318 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 NXPH3O95157 252 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 NDUFA7O95182 113 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 IGHV4-59P01825 116 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 CNTFRP26992 372 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 EIF2B2P49770 351 aaKnown RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 OR2B8PP59922 312 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 SPCS3P61009 180 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 HSPE1P61604 102 aaKnown RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 POLR2GP62487 172 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 RPL8P62917 257 aaKnown RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 VAMP2P63027 116 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 TNFRSF9Q07011 255 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 PRR31Q5SQ13 230 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 MMD2Q8IY49 270 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 OR52E5Q8NH55 327 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 CLCC1Q96S66 551 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 QTRT1Q9BXR0 403 aaKnown RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 HSPB7Q9UBY9 170 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 RCL1Q9Y2P8 373 aaKnown RBP10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
SSSCA1-203ENST00000526877 CEBPZOSA8MTT3 80 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 E5RGE8 158 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 G3V3Q6 166 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 SYNGR2O43760 224 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 SSSCA1O60232 199 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 ACTL6BO94805 426 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 NDUFA3O95167 84 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 LY86O95711 162 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 CRYGBP07316 175 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 FGF2P09038 288 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 MAS1LP35410 378 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 F2RL1P55085 397 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 AARDQ4LEZ3 155 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 TMEM65Q6PI78 240 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 ZNF546Q86UE3 836 aa10.09□□□□□ -0.79
SSSCA1-203ENST00000526877 PPP1R27Q86WC6 154 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms