RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 AIFM2Q9BRQ8 373 aa11.47□□□□□ -0.57
COLCA2-202ENST00000526216 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 MSGN1A6NI15 193 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 H3BUX3 64 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 SSSCA1O60232 199 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 SNAPC5O75971 98 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 FAM106CPP0CH98 169 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 IAPPP10997 89 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.57
COLCA2-202ENST00000526216 LAMTOR1Q6IAA8 161 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 Q8N9W7 124 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 VSTM2AQ8TAG5 236 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 CLCC1Q96S66 551 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 PRNDQ9UKY0 176 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 TCF19Q9Y242 345 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 OR51B2Q9Y5P1 312 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 ACANP16112 2415 aa11.46□□□□□ -0.57
COLCA2-202ENST00000526216 FXYD6-FXYD2A0A087WZ82 144 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 RNF222A6NCQ9 220 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 SYNGR2O43760 224 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 CHST1O43916 411 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 IGHV4-59P01825 116 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 OPN1MWP04001 364 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
COLCA2-202ENST00000526216 FGL1Q08830 312 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 LY6EQ16553 131 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 AANATQ16613 207 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 TNFSF18Q9UNG2 199 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 CSPG4Q6UVK1 2322 aa11.45□□□□□ -0.58
COLCA2-202ENST00000526216 WRBO00258 174 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 RBMXL2O75526 392 aaKnown RBP11.44□□□□□ -0.58
COLCA2-202ENST00000526216 OR2F2O95006 317 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 CXCL2P19875 107 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 VDAC2P45880 294 aaPredicted RBP11.44□□□□□ -0.58
COLCA2-202ENST00000526216 EIF2B2P49770 351 aaKnown RBP11.44□□□□□ -0.58
COLCA2-202ENST00000526216 SPCS3P61009 180 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
COLCA2-202ENST00000526216 TMEM65Q6PI78 240 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 Q6YL49 198 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 PPP1R27Q86WC6 154 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 MMD2Q8IY49 270 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 C9orf62Q8N4C0 152 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 THAP6Q8TBB0 222 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 RBM14Q96PK6 669 aaKnown RBP11.44□□□□□ -0.58
COLCA2-202ENST00000526216 TMEM160Q9NX00 188 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
COLCA2-202ENST00000526216 SH2D7A6NKC9 451 aaPredicted RBP11.43□□□□□ -0.58
COLCA2-202ENST00000526216 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 CA2P00918 260 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 IFNA17P01571 189 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 AMY1AP04745 511 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 FGF2P09038 288 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 CD99P14209 185 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 IER3P46695 156 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 NDPQ00604 133 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 PRCDQ00LT1 54 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 LGALSLQ3ZCW2 172 aaPredicted RBP11.43□□□□□ -0.58
COLCA2-202ENST00000526216 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
COLCA2-202ENST00000526216 HYLS1Q96M11 299 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 SLC25A33Q9BSK2 321 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
COLCA2-202ENST00000526216 NDUFA4L2Q9NRX3 87 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 ZFP57Q9NU63 452 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 KIAA1456Q9P272 454 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
COLCA2-202ENST00000526216 IGSF23A1L1A6 192 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 FAM24AA6NFZ4 105 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 NCBP2LA6PVI3 153 aaKnown RBP11.42□□□□□ -0.58
COLCA2-202ENST00000526216 CEBPZOSA8MTT3 80 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 E5RGE8 158 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 H3BP45 60 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 ARPC5O15511 151 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 HKR1P10072 659 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
COLCA2-202ENST00000526216 TNXAQ16473 311 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 ZNF546Q86UE3 836 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 TEX29Q8N6K0 151 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 SIGLECL1Q8N7X8 197 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 OR8H1Q8NGG4 311 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 OR4C12Q96R67 309 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 HSPB9Q9BQS6 159 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 HIVEP1P15822 2718 aa11.42□□□□□ -0.58
COLCA2-202ENST00000526216 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
COLCA2-202ENST00000526216 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
COLCA2-202ENST00000526216 RLN2P04090 185 aa11.41□□□□□ -0.58
COLCA2-202ENST00000526216 PET100P0DJ07 73 aa11.41□□□□□ -0.58
COLCA2-202ENST00000526216 FOSL1P15407 271 aa11.41□□□□□ -0.58
COLCA2-202ENST00000526216 MAS1LP35410 378 aa11.41□□□□□ -0.58
COLCA2-202ENST00000526216 SRP14P37108 136 aaKnown RBP11.41□□□□□ -0.58
COLCA2-202ENST00000526216 RPL27AP46776 148 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms