RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 RNF122Q9H9V4 155 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 COA4Q9NYJ1 87 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 SLC23A2Q9UGH3 650 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 ATPIF1Q9UII2 106 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 TNFSF18Q9UNG2 199 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 CCL26Q9Y258 94 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 TMEM14AQ9Y6G1 99 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 ZNF780BQ9Y6R6 833 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 TRBV6-7A0A0A0MS04 114 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 A0A1B0GWA3 101 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 GGT3PA6NGU5 568 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 OR4C45A6NMZ5 311 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 ZNF705GA8MUZ8 300 aaPredicted RBP3.57□□□□□ -1.84
SKP1-213ENST00000524288 H0YJW9 148 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 RAD1O60671 282 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 ATG12O94817 140 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 VAMP5O95183 116 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 RLN2P04090 185 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 CD74P04233 296 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 MRPL3P09001 348 aaKnown RBP3.57□□□□□ -1.84
SKP1-213ENST00000524288 CPMP14384 443 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 SPI1P17947 270 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 CMPK1P30085 196 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 ACTBP60709 375 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 ACTG1P63261 375 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 ZNF141Q15928 474 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 GLT8D1Q68CQ7 371 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 SLC16A13Q7RTY0 426 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 VN1R4Q7Z5H5 301 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 HMGN2P46Q86SG4 172 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 FAM58AQ8N1B3 248 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 TMEM229BQ8NBD8 167 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 OR4E2Q8NGC2 313 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 OR1J4Q8NGS1 313 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 OR10G6Q8NH81 332 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 FGF13Q92913 245 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 SLC25A21Q9BQT8 299 aaPredicted RBP3.57□□□□□ -1.84
SKP1-213ENST00000524288 GINS4Q9BRT9 223 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 OR51V1Q9H2C8 321 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 PRO0461Q9UI25 63 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 SLC22A7Q9Y694 548 aa3.57□□□□□ -1.84
SKP1-213ENST00000524288 IGKV2D-24A0A075B6R9 120 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 TRAV27A0A087WT01 109 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 FXYD6-FXYD2A0A087WZ82 144 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 TMEM212A6NML5 194 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 PHYHO14832 338 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 MAGEB4O15481 346 aaPredicted RBP3.56□□□□□ -1.84
SKP1-213ENST00000524288 ARPC5O15511 151 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 RBBP9O75884 186 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 SMIM6P0DI80 62 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 CD79AP11912 226 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 HIST1H1CP16403 213 aaKnown RBP3.56□□□□□ -1.84
SKP1-213ENST00000524288 P2RY2P41231 377 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 RAB13P51153 203 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 SLC35B1P78383 322 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 PDGFRLQ15198 375 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 ATP6V1FQ16864 119 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 OPN5Q6U736 354 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 DRAM2Q6UX65 266 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 ZNF550Q7Z398 422 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 SVBPQ8N300 66 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 C12orf45Q8N5I9 185 aaPredicted RBP3.56□□□□□ -1.84
SKP1-213ENST00000524288 ZDHHC22Q8N966 263 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 CYB561A3Q8NBI2 242 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 SLC30A7Q8NEW0 376 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 OR1M1Q8NGA1 313 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 OR10K1Q8NGX5 313 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 UBALD1Q8TB05 177 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 CIRBP-AS1Q8TBR5 109 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 ING5Q8WYH8 240 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 ZMYND19Q96E35 227 aaPredicted RBP3.56□□□□□ -1.84
SKP1-213ENST00000524288 NARS2Q96I59 477 aaKnown RBP3.56□□□□□ -1.84
SKP1-213ENST00000524288 KCNS1Q96KK3 526 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 PDCD1LG2Q9BQ51 273 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 HINT2Q9BX68 163 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 POTEKPQ9BYX7 375 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 FXYD6Q9H0Q3 95 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 MRM2Q9UI43 246 aaKnown RBP3.56□□□□□ -1.84
SKP1-213ENST00000524288 GNG8Q9UK08 70 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 ANAPC10Q9UM13 185 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 ZNF337Q9Y3M9 751 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 CABIN1Q9Y6J0 2220 aa3.56□□□□□ -1.84
SKP1-213ENST00000524288 PRRC2BQ5JSZ5 2229 aaKnown RBP3.55□□□□□ -1.84
SKP1-213ENST00000524288 TRAV8-7A0A075B6U6 113 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 A0A087WUJ7 227 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 KANTRA0A1W2PQU2 76 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 TMEM218A2RU14 115 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 CEACAM18A8MTB9 384 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 F8W036 122 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 H7C2Y5 167 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 BPY2O14599 106 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 SOCS1O15524 211 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 ZNF207O43670 478 aaKnown RBP3.55□□□□□ -1.84
SKP1-213ENST00000524288 APOC1P02654 83 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 APOC3P02656 99 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 S100A8P05109 93 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 GYPBP06028 91 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 CD14P08571 375 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 OR4E1P0C645 316 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms