RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 RHOVQ96L33 236 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 ICE1Q9Y2F5 2266 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 TRBV20OR9-2A0A075B6H5 130 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 KBTBD11-OT1A0A1B0GTJ5 212 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 IL6RP08887 468 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-228ENST00000524023 GZMBP10144 247 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-228ENST00000524023 OR4A47Q6IF82 309 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 VHLLQ6RSH7 139 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-228ENST00000524023 FAM222BQ8WU58 562 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 SSMEM1Q8WWF3 244 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 TMEM14BQ9NUH8 114 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 FOXA2Q9Y261 457 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-228ENST00000524023 IGLV3-9A0A075B6K5 115 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 THBS3P49746 956 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 RPL15P61313 204 aaKnown RBP9.11□□□□□ -0.95
HDAC9-228ENST00000524023 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
HDAC9-228ENST00000524023 FOXL1Q12952 345 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 PRSS8Q16651 343 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 TEPPQ6URK8 271 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 SFRP2Q96HF1 295 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 TMEM204Q9BSN7 226 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 RAB9BQ9NP90 201 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 LAMA5O15230 3695 aa9.11□□□□□ -0.95
HDAC9-228ENST00000524023 RAI1Q7Z5J4 1906 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-228ENST00000524023 DMXL1Q9Y485 3027 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 EP300Q09472 2414 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-228ENST00000524023 PLCE1Q9P212 2302 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 A0A0U1RQK1 487 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 SCO2A0A1W2PP80 73 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 ZNF320A2RRD8 509 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 TSTD3H0UI37 97 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 CEACAM4O75871 244 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 NPY1RP25929 384 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 GATA4P43694 442 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 MRPS11P82912 194 aaKnown RBP9.1□□□□□ -0.95
HDAC9-228ENST00000524023 DUX4L9Q6RFH8 374 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-228ENST00000524023 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 BTF3L4Q96K17 158 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 IDI2-AS1Q9NZ38 188 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
HDAC9-228ENST00000524023 OTOGLQ3ZCN5 2332 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 CA2P00918 260 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 DDTP30046 118 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 GCHFRP30047 84 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 RHOBP62745 196 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 EFNB3Q15768 340 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 C3orf36Q3SXR2 165 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 SPATA31B1PQ5VZV4 182 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 LYG1Q8N1E2 194 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 ZADH2Q8N4Q0 377 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 STPG3Q8N7X2 389 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 ZNF439Q8NDP4 499 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 SEPSECSQ9HD40 501 aaKnown RBP9.1□□□□□ -0.95
HDAC9-228ENST00000524023 ENY2Q9NPA8 101 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 RNF7Q9UBF6 113 aa9.1□□□□□ -0.95
HDAC9-228ENST00000524023 TRGV10A0A0A0MS01 117 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 MDFIC2A0A1B0GVS7 189 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 RPL29P47914 159 aaKnown RBP9.09□□□□□ -0.95
HDAC9-228ENST00000524023 CNN1P51911 297 aaKnown RBP9.09□□□□□ -0.95
HDAC9-228ENST00000524023 POU2AF1Q16633 256 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 TCF23Q7RTU1 214 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 RPRMLQ8N4K4 120 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 SGMS2Q8NHU3 365 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 OCC1Q8TAD7 63 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 ADTRPQ96IZ2 230 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 GCM1Q9NP62 436 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 ELOVL5Q9NYP7 299 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 FAM215AQ9Y5M1 114 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 TRAPPC1Q9Y5R8 145 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 CNOT1A5YKK6 2376 aaKnown RBP9.09□□□□□ -0.95
HDAC9-228ENST00000524023 TNCP24821 2201 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 YLPM1P49750 1951 aaKnown RBP9.09□□□□□ -0.95
HDAC9-228ENST00000524023 GCGP01275 180 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 MYOD1P15172 320 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 PAX1P15863 534 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 RAB31Q13636 194 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 STUMQ69YW2 141 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 UNQ6494/PRO21346Q6UXR6 183 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 NEUROG1Q92886 237 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 TMEM18Q96B42 140 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 GAFA1Q96PS6 74 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 PARD6AQ9NPB6 346 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 OR51B2Q9Y5P1 312 aa9.09□□□□□ -0.95
HDAC9-228ENST00000524023 A0A087X0M5 115 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 A0A1B0GX30 115 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 FOXH1O75593 365 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 IGFBP2P18065 325 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 COL8A2P25067 703 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 TIMP3P35625 211 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 PRR20EP86478 221 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 PRR20CP86479 221 aa9.08□□□□□ -0.96
HDAC9-228ENST00000524023 PRR20DP86480 221 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms