RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 S1PR2O95136 353 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 RPL8P62917 257 aaKnown RBP9.79□□□□□ -0.84
VEGFA-225ENST00000523950 RUNX1Q01196 453 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 ZFP69Q49AA0 526 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 SCGB2B2Q4G0G5 96 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 SLC25A42Q86VD7 318 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 TCTE3Q8IZS6 198 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 VKORC1L1Q8N0U8 176 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 ZNF491Q8N8L2 437 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 WFDC9Q8NEX5 89 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 OR4C16Q8NGL9 310 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 TRIM63Q969Q1 353 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 MARVELD1Q9BSK0 173 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 SCP2D1Q9UJQ7 156 aa9.79□□□□□ -0.84
VEGFA-225ENST00000523950 MSGN1A6NI15 193 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 MARCH11A6NNE9 402 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 H0Y980 276 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 MPPED1O15442 326 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 LYRM1O43325 122 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 SNAPC5O75971 98 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 CTSDP07339 412 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 IL6RP08887 468 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 RPA2P15927 270 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 HLA-GP17693 338 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 LPAR6P43657 344 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 RPL27AP46776 148 aaKnown RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 PIGPP57054 158 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 KIAA0141Q14154 515 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 ZNF585BQ52M93 769 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 ASPHD1Q5U4P2 390 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 THOC7Q6I9Y2 204 aaKnown RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 SSX9Q7RTT3 188 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 DMBX1Q8NFW5 382 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 SCGB3A2Q96PL1 93 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 SRSF8Q9BRL6 282 aaKnown RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 HRASLSQ9HDD0 168 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 C14orf166Q9Y224 244 aaKnown RBP9.78□□□□□ -0.84
VEGFA-225ENST00000523950 WNK1Q9H4A3 2382 aa9.78□□□□□ -0.84
VEGFA-225ENST00000523950 TNCP24821 2201 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 A0A0G2JLM5 398 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 FAM240BA0A1B0GVZ2 78 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 UPK2O00526 184 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 PLA2G10O15496 165 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 DUS4LO95620 317 aaKnown RBP9.77□□□□□ -0.85
VEGFA-225ENST00000523950 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 CD33P20138 364 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 TPPP2P59282 170 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 KLF9Q13886 244 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-225ENST00000523950 FAAP20Q6NZ36 180 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 ETV3LQ6ZN32 361 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 LCNL1Q6ZST4 164 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 TOMM5Q8N4H5 51 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 OR13C8Q8NGS7 320 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 MARCH1Q8TCQ1 289 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 P2RX4Q99571 388 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 CMYA5Q8N3K9 4069 aa9.77□□□□□ -0.85
VEGFA-225ENST00000523950 CCL24O00175 119 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 ATG12O94817 140 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 TRGV3P03979 118 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 SERPINE2P07093 398 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 TTC9CQ8N5M4 171 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 LINC00482Q8N8I6 264 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
VEGFA-225ENST00000523950 OR5T1Q8NG75 326 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 OR51S1Q8NGJ8 323 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 MRGPRFQ96AM1 343 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 RCC1LQ96I51 464 aaKnown RBP9.76□□□□□ -0.85
VEGFA-225ENST00000523950 ST6GAL2Q96JF0 529 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 COMMD5Q9GZQ3 224 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 GNB4Q9HAV0 340 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 MCUBQ9NWR8 336 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 FKBP11Q9NYL4 201 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 GPR132Q9UNW8 380 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 ZNF257Q9Y2Q1 563 aa9.76□□□□□ -0.85
VEGFA-225ENST00000523950 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 NPIPB5A8MRT5 1133 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 TEX22C9J3V5 150 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 I3L521 148 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 DHFRP00374 187 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 KRASP01116 189 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
VEGFA-225ENST00000523950 OR8U8P0C7N1 319 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 PI3P19957 117 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 CD300CQ08708 224 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 FHL3Q13643 280 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 C10orf55Q5SWW7 151 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 HSD17B13Q7Z5P4 300 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-225ENST00000523950 MRPL41Q8IXM3 137 aaKnown RBP9.75□□□□□ -0.85
VEGFA-225ENST00000523950 RAX2Q96IS3 184 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 USMG5Q96IX5 58 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 MCRIP2Q9BUT9 160 aaKnown RBP9.75□□□□□ -0.85
VEGFA-225ENST00000523950 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 COA4Q9NYJ1 87 aa9.75□□□□□ -0.85
VEGFA-225ENST00000523950 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms