RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PIMREGQ9BSJ6 248 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 NAGKQ9UJ70 344 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 LINC00312Q9Y6C7 94 aa10.95□□□□□ -0.66
PCDHGB1-201ENST00000523390 CA2P00918 260 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 PMCHP20382 165 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 NTF4P34130 210 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 PDLIM4P50479 330 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 QRFPP83859 136 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 PRR30Q53SZ7 412 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 OR4A47Q6IF82 309 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF705AQ6ZN79 300 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF430Q9H8G1 570 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 IGHV3-35A0A0C4DH35 117 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 J3KRW8 73 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 SELENOTP62341 195 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 SRSF3P84103 164 aaKnown RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 LHFPL1Q86WI0 220 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 FBXL15Q9H469 300 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 PF4V1P10720 104 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 MDKP21741 143 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 RPEL1Q2QD12 228 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 TMEM56-RWDD3S4R434 201 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 KRTDAPP60985 99 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 MEF2CQ06413 473 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 MRPL54Q6P161 138 aaKnown RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 RBM14Q96PK6 669 aaKnown RBP10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
PCDHGB1-201ENST00000523390 PIEZO2Q9H5I5 2752 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 COL8A1P27658 744 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 OR10D4PQ8NGN7 298 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 CCL19Q99731 98 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 RAMP3O60896 148 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 BMI1P35226 326 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 PPOXP50336 477 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 TXN2Q99757 166 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 DPM3Q9P2X0 92 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 CORTO00230 105 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF146Q15072 292 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 MORN2Q502X0 79 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 OR5R1Q8NH85 324 aa10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 OSR1Q8TAX0 266 aaPredicted RBP10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 NEU4Q8WWR8 484 aaPredicted RBP10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 SSBP3Q9BWW4 388 aaPredicted RBP10.93□□□□□ -0.66
PCDHGB1-201ENST00000523390 SAA2-SAA4A0A096LPE2 208 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 SAA2P0DJI9 122 aaPredicted RBP10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 RAB5AP20339 215 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF324BQ6AW86 544 aaPredicted RBP10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 WDR31Q8NA23 367 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 PRR14LQ5THK1 2151 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 TRBV23-1A0A0A0MS06 115 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 B4DEV8 164 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 H3BTX0 84 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 PHOX2AO14813 284 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 FOXH1O75593 365 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 MPZP25189 248 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 FXYD3Q14802 87 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 DNM1P46Q6ZS02 220 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 OR4A5Q8NH83 315 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 MS4A10Q96PG2 267 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 SMDT1Q9H4I9 107 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 SRD5A3Q9H8P0 318 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 AUP1Q9Y679 476 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 BPTFQ12830 3046 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 HSPB1P04792 205 aaKnown RBP10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 PIP4P1Q86T03 277 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 HS3ST6Q96QI5 342 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 DMRTA2Q96SC8 542 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 MSRB2Q9Y3D2 182 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 MLNRO43193 412 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 TDGF1P13385 188 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 PAX6P26367 422 aa10.92□□□□□ -0.66
PCDHGB1-201ENST00000523390 YPEL1O60688 119 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 NAPSAO96009 420 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 MOSP00540 346 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 FAM209BQ5JX69 171 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 MBNL2Q5VZF2 373 aaKnown RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 PCSK4Q6UW60 755 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 RCC1LQ96I51 464 aaKnown RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 YPEL2Q96QA6 119 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 YLPM1P49750 1951 aaKnown RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 TMSB15BA0A087X1C1 80 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 ARL14EPLP0DKL9 152 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 EGR1P18146 543 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 ANAPC16Q96DE5 110 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 C18orf12Q96KH6 178 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 SLC31A2O15432 143 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 P01737 135 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 RNF212Q495C1 297 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 WFDC3Q8IUB2 231 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 TMPRSS5Q9H3S3 457 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 ZMAT5Q9UDW3 170 aaKnown RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 DOCK11Q5JSL3 2073 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms