RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 LINC01619G3V211 115 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 K7EIL1 84 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 CTDSPLO15194 276 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
CLK4-211ENST00000522556 KRASP01116 189 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 IFNA6P05013 189 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 OR2B8PP59922 312 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 RHOGP84095 191 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 SCGB2B2Q4G0G5 96 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 ARRDC1Q8N5I2 433 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 TTC9CQ8N5M4 171 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 OR4C16Q8NGL9 310 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 C15orf40Q8WUR7 153 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 DPF1Q92782 380 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 AKIP1Q9NQ31 210 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 V9GYH0 126 aa13.74□□□□□ -0.21
CLK4-211ENST00000522556 C13orf42A0A1B0GVH6 325 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 DBX1A6NMT0 343 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 TBPP20226 339 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 CD40LGP29965 261 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 MAS1LP35410 378 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 MRPS10P82664 201 aaKnown RBP13.73□□□□□ -0.21
CLK4-211ENST00000522556 OR10W1Q8NGF6 305 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 MARCH1Q8TCQ1 289 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 CD300LFQ8TDQ1 290 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 MCRIP2Q9BUT9 160 aaKnown RBP13.73□□□□□ -0.21
CLK4-211ENST00000522556 S4R3C0 116 aa13.73□□□□□ -0.21
CLK4-211ENST00000522556 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 IGLC7A0M8Q6 106 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 OVOL1O14753 267 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 OR2J3O76001 311 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 BRI3O95415 125 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 HSPB1P04792 205 aaKnown RBP13.72□□□□□ -0.21
CLK4-211ENST00000522556 PIGPP57054 158 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 ZNF79Q15937 498 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 IZUMO4Q1ZYL8 232 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 TP53RKQ96S44 253 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 DMRT1Q9Y5R6 373 aa13.72□□□□□ -0.21
CLK4-211ENST00000522556 FABP12A6NFH5 140 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 GSTZ1O43708 216 aaPredicted RBP13.71□□□□□ -0.21
CLK4-211ENST00000522556 ERVK-16P61578 105 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 SSBP1Q04837 148 aaKnown RBP13.71□□□□□ -0.21
CLK4-211ENST00000522556 EXOSC2Q13868 293 aaKnown RBP13.71□□□□□ -0.21
CLK4-211ENST00000522556 LPCAT3Q6P1A2 487 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 ZNF343Q6P1L6 599 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 HAPLN4Q86UW8 402 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 TERB2Q8NHR7 220 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 MRAPQ8TCY5 172 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 SEC22AQ96IW7 307 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 FANCD2OSQ96PS1 177 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 ZNF257Q9Y2Q1 563 aa13.71□□□□□ -0.21
CLK4-211ENST00000522556 ANKRD20A5PA0PJZ0 165 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 NPIPB5A8MRT5 1133 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 NDUFB8O95169 186 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 CTRB1P17538 263 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 PSMB6P28072 239 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 RND3P61587 244 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 SP6Q3SY56 376 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 C9orf66Q5T8R8 295 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 CTRB2Q6GPI1 263 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 TRIM63Q969Q1 353 aa13.7□□□□□ -0.22
CLK4-211ENST00000522556 A0A0G2JLM5 398 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 ZNF701M0R085 212 aaPredicted RBP13.69□□□□□ -0.22
CLK4-211ENST00000522556 CRYGCP07315 174 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 OR51S1Q8NGJ8 323 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 PRR25Q96S07 402 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 AIFM2Q9BRQ8 373 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
CLK4-211ENST00000522556 DPPA5A6NC42 116 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 FAM223BA6NKX1 122 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 H0Y980 276 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 BMPR1BO00238 502 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 WT1-ASQ06250 92 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 MEF2DQ14814 521 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 C15orf32Q32M92 178 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 REC114Q7Z4M0 266 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 CCDC190Q86UF4 302 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 FAM223AQ8IWN6 122 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 USMG5Q96IX5 58 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 CCDC140Q96MF4 163 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 RTBDNQ9BSG5 229 aaPredicted RBP13.68□□□□□ -0.22
CLK4-211ENST00000522556 QTRT1Q9BXR0 403 aaKnown RBP13.68□□□□□ -0.22
CLK4-211ENST00000522556 GPR61Q9BZJ8 451 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 C5orf66Q9H5L9 145 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 RANGRFQ9HD47 186 aaPredicted RBP13.68□□□□□ -0.22
CLK4-211ENST00000522556 PEF1Q9UBV8 284 aaKnown RBP13.68□□□□□ -0.22
CLK4-211ENST00000522556 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
CLK4-211ENST00000522556 TGP01266 2768 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 A0A0G2JRQ6 117 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 MFSD2BA6NFX1 497 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 PPP5D1E7EU14 171 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 CTSDP07339 412 aaPredicted RBP13.67□□□□□ -0.22
CLK4-211ENST00000522556 PTBP1P26599 531 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms