RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PPIBP23284 216 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 S100A1P23297 94 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC6A1P30531 599 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 S100A3P33764 101 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 RCVRNP35243 200 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 GDI2P50395 445 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 EMP2P54851 167 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 RHOAP61586 193 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 LSM3P62310 102 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNHIT3Q15649 155 aaPredicted RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 NDUFA5Q16718 116 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 MRPL2Q5T653 305 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 HES3Q5TGS1 186 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 PTRHD1Q6GMV3 140 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 IGFL3Q6UXB1 125 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 TMEM136Q6ZRR5 245 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 SSX7Q7RTT5 188 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 FAM19A3Q7Z5A8 133 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 CLECL1Q8IZS7 167 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZFP82Q8N141 532 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 OR8A1Q8NGG7 326 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 WFDC5Q8TCV5 224 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 DDIT4LQ96D03 193 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 RMI2Q96E14 147 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZHX1-C8orf76Q96EF9 292 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 TMEM56Q96MV1 263 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 CDCA4Q9BXL8 241 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 EBPLQ9BY08 206 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 PLA2G12AQ9BZM1 189 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 CHST5Q9GZS9 411 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 CCDC90BQ9GZT6 254 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 VSIRQ9H7M9 311 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 NDUFB11Q9NX14 153 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 SCN3BQ9NY72 215 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 DHCR7Q9UBM7 475 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 NCOA6Q14686 2063 aaPredicted RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 KIAA0100Q14667 2235 aaKnown RBP1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 KMT2EQ8IZD2 1858 aa1.82□□□□□ -2.12
HMGN1P28-201ENST00000521340 PNMA8CA0A1B0GUJ8 204 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 EFCAB10A6NFE3 127 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 A8MWP4 228 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 EVPLLA8MZ36 301 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 IGLL5B9A064 214 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 C9JQL5 133 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 E7EQ34 232 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF670-ZNF695F2Z2N8 137 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 PSIP1O75475 530 aaKnown RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SOX14O95416 240 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 IGHG2P01859 326 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 OPN1SWP03999 348 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 INAFM2P0DMQ5 153 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 HLA-EP13747 358 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 S100A5P33763 92 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 NKX2-5P52952 324 aaPredicted RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 DEFA1P59665 94 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 DEFA3P59666 94 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 KRTAP10-10P60014 251 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 COPZ1P61923 177 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SNRPGP62308 76 aaKnown RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 TBPL1P62380 186 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SKP1P63208 163 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 PSPHP78330 225 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 FAM3AP98173 230 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 MLLT11Q13015 90 aaPredicted RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 KRR1Q13601 381 aaKnown RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 CDK10Q15131 360 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 TMEM241Q24JQ0 296 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SPIN4Q56A73 249 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 NXNL2Q5VZ03 156 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 C12orf73Q69YU5 71 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 NOXRED1Q6NXP6 359 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 C22orf39Q6P5X5 142 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 FAM131AQ6UXB0 335 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 PAGE2Q7Z2X7 111 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 DAZ4Q86SG3 579 aaKnown RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 TCTE3Q8IZS6 198 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 GATD1Q8NB37 220 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 OR6K3Q8NGY3 331 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 OR8S1Q8NH09 359 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF675Q8TD23 568 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC7A6Q92536 515 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 YPEL4Q96NS1 127 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 NIPSNAP1Q9BPW8 284 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 DOHHQ9BU89 302 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC19A3Q9BZV2 496 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 C6orf62Q9GZU0 229 aaPredicted RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC25A31Q9H0C2 315 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 MIXL1Q9H2W2 232 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 NMNAT1Q9HAN9 279 aaPredicted RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 TPT1P8Q9HAU6 139 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 DAZ1Q9NQZ3 744 aaKnown RBP1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 NAGKQ9UJ70 344 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 ANGPT4Q9Y264 503 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 HS3ST2Q9Y278 367 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF780BQ9Y6R6 833 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 BRWD1Q9NSI6 2320 aa1.81□□□□□ -2.12
HMGN1P28-201ENST00000521340 A0A1W2PRG6 482 aa1.8□□□□□ -2.12
HMGN1P28-201ENST00000521340 CCRL2O00421 344 aa1.8□□□□□ -2.12
HMGN1P28-201ENST00000521340 FAAHO00519 579 aa1.8□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC31A1O15431 190 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms