RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 A0A087WUU8 490 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 A0A096LNJ9 63 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 A0A1B0GVY2 172 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 C7orf77A4D0Y5 90 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 OR5H14A6NHG9 310 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 IFITM5A6NNB3 132 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 A8MWP6 167 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 PRAMEF26H0Y7S4 382 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 MAGEB4O15481 346 aaPredicted RBP4.83□□□□□ -1.64
LSM1-202ENST00000520286 FADS1O60427 444 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 MPIP34949 423 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 SSTR5P35346 364 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 DRD3P35462 400 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 IFNGR2P38484 337 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 KIR3DL2P43630 455 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 TAS2R20P59543 309 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
LSM1-202ENST00000520286 PFN3P60673 137 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 CACNG7P62955 275 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 PAFAH1B2P68402 229 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 COTL1Q14019 142 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 RHEBQ15382 184 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 SURF2Q15527 256 aaPredicted RBP4.83□□□□□ -1.64
LSM1-202ENST00000520286 NCMAPQ5T1S8 102 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 HIST2H3AQ71DI3 136 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 BAP18Q8IXM2 172 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 OR10J5Q8NHC4 309 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 TNFAIP8L1Q8WVP5 186 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 S100PBPQ96BU1 408 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 TIMM17AQ99595 171 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 SCRT1Q9BWW7 348 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 SYT4Q9H2B2 425 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 PRORYQ9H606 182 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 RPP21Q9H633 154 aaKnown RBP4.83□□□□□ -1.64
LSM1-202ENST00000520286 BCL2L10Q9HD36 194 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 LHX9Q9NQ69 397 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 UBQLN4Q9NRR5 601 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 CALML5Q9NZT1 146 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 NBEAQ8NFP9 2946 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 DOCK8Q8NF50 2099 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 AKAP13Q12802 2813 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 NAV2Q8IVL1 2488 aa4.83□□□□□ -1.64
LSM1-202ENST00000520286 F5P12259 2224 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 ASXL3Q9C0F0 2248 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 YLPM1P49750 1951 aaKnown RBP4.82□□□□□ -1.64
LSM1-202ENST00000520286 C2orf16Q68DN1 1984 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 DENND4CQ5VZ89 1909 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 IGLV3-16A0A075B6K0 115 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 A0A1B0GVX0 72 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 SLC5A10A0PJK1 596 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 DAPL1A0PJW8 107 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 MGAT4DA6NG13 374 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR2AT4A6NND4 320 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 C9JQL5 133 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 PIN1P1O15428 100 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 DLEU1O43261 78 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 MED6O75586 246 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
LSM1-202ENST00000520286 YIF1AO95070 293 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR4E1P0C645 316 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 AKAIN1P0CW23 69 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 CDK2P24941 298 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 MYCNOSP40205 109 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 ATP5J2P56134 94 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR2B8PP59922 312 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 EIF5AP63241 154 aaKnown RBP4.82□□□□□ -1.64
LSM1-202ENST00000520286 CDK5R1Q15078 307 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 RSU1Q15404 277 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR8G1Q15617 311 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 MESTQ5EB52 335 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 SAPCD1Q5SSQ6 148 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 HIST2H3PS2Q5TEC6 136 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 SYS1Q8N2H4 156 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR13D1Q8NGV5 346 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR6K6Q8NGW6 343 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 RNASEH2CQ8TDP1 164 aaKnown RBP4.82□□□□□ -1.64
LSM1-202ENST00000520286 C16orf78Q8WTQ4 265 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 SMIM19Q96E16 107 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 WDR34Q96EX3 536 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 DERL3Q96Q80 235 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 SLC17A9Q9BYT1 436 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 PARP11Q9NR21 331 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 SIRT7Q9NRC8 400 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 OR5V1Q9UGF6 321 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 ZNF230Q9UIE0 474 aaPredicted RBP4.82□□□□□ -1.64
LSM1-202ENST00000520286 WIF1Q9Y5W5 379 aa4.82□□□□□ -1.64
LSM1-202ENST00000520286 DOCK6Q96HP0 2047 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.81□□□□□ -1.64
LSM1-202ENST00000520286 IGHV5-10-1A0A0J9YXX1 117 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 A0A1B0GW64 132 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 FAM183AA6NL82 134 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 HMGN4O00479 90 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 METTL15P1P0C7V9 234 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 SULT1A2P50226 295 aa4.81□□□□□ -1.64
LSM1-202ENST00000520286 JOSD1Q15040 202 aaPredicted RBP4.81□□□□□ -1.64
LSM1-202ENST00000520286 TOMM34Q15785 309 aaPredicted RBP4.81□□□□□ -1.64
LSM1-202ENST00000520286 ATP6V1FQ16864 119 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms