RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 KRTAP10-1P60331 282 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 REEP5Q00765 189 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 LYZL1Q6UWQ5 148 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 PPP1R2P1Q96PQ5 205 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 C9orf16Q9BUW7 83 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 PRTFDC1Q9NRG1 225 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 PAQR5Q9NXK6 330 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 SCRIBQ14160 1630 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 TRBV20OR9-2A0A075B6H5 130 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 SMIM9A6NGZ8 99 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 H3BQV1 296 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 HLA-DRB1P01911 266 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 C1QAP02745 245 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 IFNA6P05013 189 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 GTF2A1P52655 376 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 SNRPD2P62316 118 aaKnown RBP2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 Q6ZS49 121 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 CDC26Q8NHZ8 85 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 BORCS7Q96B45 105 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 CMTM6Q9NX76 183 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 RBM7Q9Y580 266 aaKnown RBP2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 MYO16Q9Y6X6 1858 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 ZNF407Q9C0G0 2248 aa2.36□□□□□ -2.03
HMGB1P46-201ENST00000520062 NCOA1Q15788 1441 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 IGHV3-64A0A075B6Q5 118 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 A0A087WUJ7 227 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 A0A0J9YY10 115 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 A0A1B0GX78 115 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 LEPROTO15243 131 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 KLRC4O43908 158 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 FADS1O60427 444 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 CREBL2O60519 120 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 NOS1APO75052 506 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 HAND1O96004 215 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 CCR2P41597 374 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 TPI1P60174 286 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 SPA17Q15506 151 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 TMEM97Q5BJF2 176 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 LPCAT3Q6P1A2 487 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 SELENOSQ9BQE4 189 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 TLNRD1Q9H1K6 362 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 EFCAB1Q9HAE3 211 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 FUT9Q9Y231 359 aa2.35□□□□□ -2.03
HMGB1P46-201ENST00000520062 WRNQ14191 1432 aaPredicted RBP eCLIP2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 COL5A1P20908 1838 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 HINT1P49773 126 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 RAB14P61106 215 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 HIST1H4AP62805 103 aaKnown RBP2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 HIST1H3AP68431 136 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 CCL20P78556 96 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 H3F3AP84243 136 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 Q6ZTI0 123 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 OR5B17Q8NGF7 314 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 OR4X2Q8NGF9 303 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 MRPL30Q8TCC3 161 aaKnown RBP2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 KLK6Q92876 244 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 IMMP2LQ96T52 175 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 TTTY12Q9BZ98 90 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 ULBP3Q9BZM4 244 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 COMMD5Q9GZQ3 224 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 WDR61Q9GZS3 305 aaKnown RBP2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 DCSTAMPQ9H295 470 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 CISHQ9NSE2 258 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 GLTPQ9NZD2 209 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 FBXO5Q9UKT4 447 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 PKIGQ9Y2B9 76 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 TIMM9Q9Y5J7 89 aa2.34□□□□□ -2.03
HMGB1P46-201ENST00000520062 TTC21AQ8NDW8 1320 aa2.34□□□□□ -2.04
HMGB1P46-201ENST00000520062 NUP155O75694 1391 aa2.34□□□□□ -2.04
HMGB1P46-201ENST00000520062 MTUS2Q5JR59 1369 aa2.34□□□□□ -2.04
HMGB1P46-201ENST00000520062 ATG2BQ96BY7 2078 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 S1PR2O95136 353 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 LGALS1P09382 135 aaKnown RBP2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 TFPTP0C1Z6 253 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPL5P46777 297 aaKnown RBP2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 MRPS25P82663 173 aaKnown RBP2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 IAH1Q2TAA2 248 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 Q8NDZ9 215 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 SLC7A6Q92536 515 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 CEP19Q96LK0 163 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 ERMAPQ96PL5 475 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 TXNDC17Q9BRA2 123 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 TRIM4Q9C037 500 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 IL36BQ9NZH7 164 aa2.33□□□□□ -2.04
HMGB1P46-201ENST00000520062 ADGRB3O60242 1522 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 DOCK6Q96HP0 2047 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 TRPM6Q9BX84 2022 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 ADAMTS7Q9UKP4 1686 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 A0A0G2JQZ4 141 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 ARRDC5A6NEK1 342 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 OR4C46A6NHA9 309 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 H3BRN7 92 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 FAAHO00519 579 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 PRM2P04554 102 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 MSMBP08118 114 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPL28P46779 137 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms