RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PITX3O75364 302 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 TMEM50AO95807 157 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 CRYZL1O95825 349 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 IGKV1-5P01602 117 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 HBZP02008 142 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 PRSS1P07477 247 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 HOXD4P09016 255 aaPredicted RBP3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L2P0CJ85 424 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L3P0CJ86 424 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L4P0CJ87 422 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L5P0CJ88 424 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L6P0CJ89 424 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L7P0CJ90 424 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 PSG2P11465 335 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 F2RP25116 425 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 CD80P33681 288 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 SSTR5P35346 364 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 GLRXP35754 106 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 LPAR6P43657 344 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 P2RY1P47900 373 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 TMEM33P57088 247 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 KLF3P57682 345 aaPredicted RBP3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 POLR2GP62487 172 aaKnown RBP eCLIP3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 EWSR1Q01844 656 aaKnown RBP eCLIP3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 PAX5Q02548 391 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 AESQ08117 197 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 TMEM41BQ5BJD5 291 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4L9Q6RFH8 374 aaPredicted RBP3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 Q6ZRG5 221 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 ZNF695Q8IW36 515 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 C1orf174Q8IYL3 243 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DRAM1Q8N682 238 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 TPRX1Q8N7U7 411 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 NUP37Q8NFH4 326 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 OR2Z1Q8NG97 314 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 OR10G8Q8NGN5 311 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 MRGPRDQ8TDS7 321 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 ITLN1Q8WWA0 313 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 IL1F10Q8WWZ1 152 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 GPR146Q96CH1 333 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 ABHD14BQ96IU4 210 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 OR2V2Q96R30 315 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 SPIN2AQ99865 258 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 SPIN2BQ9BPZ2 258 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DCTN5Q9BTE1 182 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DNTTIP1Q9H147 329 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 OR2S2Q9NQN1 319 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 DUX4Q9UBX2 424 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 ERRFI1Q9UJM3 462 aaPredicted RBP3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 RNF115Q9Y4L5 304 aa3.87□□□□□ -1.79
CTNNA1-212ENST00000518919 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 A0A1B0GUV1 79 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 MEX3AA1L020 520 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 DPRXA6NFQ7 191 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 FAM24AA6NFZ4 105 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 SSSCA1O60232 199 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 IGHV1-46P01743 117 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 OR8U9P0C7N5 309 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 P0C879 139 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ADCYAP1P18509 176 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 VDAC1P21796 283 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 PPP1CCP36873 323 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 CFHR2P36980 270 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 GABRA2P47869 451 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 SULT1A2P50226 295 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 PAX9P55771 341 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 XGP55808 180 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 RPS23P62266 143 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 RPL30P62888 115 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ARL16Q0P5N6 197 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 EDDM3AQ14507 147 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 MSMO1Q15800 293 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 FAM201AQ5SY85 155 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 TCF23Q7RTU1 214 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ERASQ7Z444 233 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ZNF575Q86XF7 245 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 TGIF2LYQ8IUE0 185 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 CMTM1Q8IZ96 169 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 STPG2Q8N412 459 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ZNF645Q8N7E2 425 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 UBAC2Q8NBM4 344 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 BPIFCQ8NFQ6 507 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 OR8U1Q8NH10 309 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 C8orf46Q8TAG6 207 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 FAM222BQ8WU58 562 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ARL11Q969Q4 196 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 MUCL1Q96DR8 90 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 AKR1E2Q96JD6 320 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 SMIM8Q96KF7 97 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 GINS3Q9BRX5 216 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 MAGT1Q9H0U3 335 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 OR2D2Q9H210 308 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 SH3BGRL3Q9H299 93 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 FNDC4Q9H6D8 234 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 ZC4H2Q9NQZ6 224 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 LYRM2Q9NU23 88 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 DCAF16Q9NXF7 216 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 GLS2Q9UI32 602 aa3.86□□□□□ -1.79
CTNNA1-212ENST00000518919 NUP50Q9UKX7 468 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms