RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 MYL12AP19105 171 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 CCR2P41597 374 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 AKR1C3P42330 323 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 MAGEA2P43356 314 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 MAGEA12P43365 314 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 ZNF705AQ6ZN79 300 aaPredicted RBP0.94□□□□□ -2.26
SKP1-203ENST00000517625 RASSF6Q6ZTQ3 369 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 KTN1-AS1Q86SY8 53 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 LRRC28Q86X40 367 aaPredicted RBP0.94□□□□□ -2.26
SKP1-203ENST00000517625 SLC22A24Q8N4F4 322 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 RPP25LQ8N5L8 163 aaKnown RBP0.94□□□□□ -2.26
SKP1-203ENST00000517625 NMNAT3Q96T66 252 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 MRPL32Q9BYC8 188 aaKnown RBP0.94□□□□□ -2.26
SKP1-203ENST00000517625 MAP1LC3AQ9H492 121 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 HRASLSQ9HDD0 168 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 TRPM6Q9BX84 2022 aa0.94□□□□□ -2.26
SKP1-203ENST00000517625 SPEGQ15772 3267 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 MPDZO75970 2070 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 DICER1Q9UPY3 1922 aaKnown RBP0.93□□□□□ -2.26
SKP1-203ENST00000517625 GBF1Q92538 1859 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 HERC1Q15751 4861 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 TRAV7A0A075B6U4 112 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 A8MUN3 132 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 COX7A2LO14548 114 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 TYMSP04818 313 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 CDK9P50750 372 aaKnown RBP0.93□□□□□ -2.26
SKP1-203ENST00000517625 CAV1Q03135 178 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 SLC38A11Q08AI6 406 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 PPP1R1AQ13522 171 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 ACSM3Q53FZ2 586 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 OGFRL1Q5TC84 451 aaPredicted RBP0.93□□□□□ -2.26
SKP1-203ENST00000517625 LRRN1Q6UXK5 716 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 HIST2H3AQ71DI3 136 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 RPS19BP1Q86WX3 136 aaKnown RBP0.93□□□□□ -2.26
SKP1-203ENST00000517625 TMEM161BQ8NDZ6 487 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 OR51T1Q8NGJ9 327 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 OR2T27Q8NH04 317 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 EEF1AKMT1Q8WVE0 214 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 ROPN1LQ96C74 230 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 CHST6Q9GZX3 395 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 PRELID1Q9Y255 219 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 C15orf41Q9Y2V0 281 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 SPTBN5Q9NRC6 3674 aaKnown RBP0.93□□□□□ -2.26
SKP1-203ENST00000517625 KIF15Q9NS87 1388 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 RAPGEF6Q8TEU7 1601 aa0.93□□□□□ -2.26
SKP1-203ENST00000517625 ZDBF2Q9HCK1 2354 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 SLX4Q8IY92 1834 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 PCNX1Q96RV3 2341 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 COL4A1P02462 1669 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 EP300Q09472 2414 aaPredicted RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 A0A1B0GV50 99 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 OR4C45A6NMZ5 311 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 HMSDA8MTL9 139 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 COCHO43405 550 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 ZNF737O75373 536 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 TPM3P06753 285 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 MSMBP08118 114 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 LGALS1P09382 135 aaKnown RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 RPL12P30050 165 aaKnown RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 RAB14P61106 215 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 RPL30P62888 115 aaKnown RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 TNFAIP6P98066 277 aaPredicted RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 MLLT11Q13015 90 aaPredicted RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 C1orf194Q5T5A4 169 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 C9orf64Q5T6V5 341 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 DCXRQ7Z4W1 244 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 TMEM86AQ8N2M4 240 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 SGMS2Q8NHU3 365 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 IMMP2LQ96T52 175 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 TTTY13Q9BZ97 58 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 UPF3BQ9BZI7 483 aaKnown RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 DRC3Q9H069 523 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 CST9LQ9H4G1 147 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 FGFR1OP2Q9NVK5 253 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 MED9Q9NWA0 146 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 NKIRAS1Q9NYS0 192 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 C3orf18Q9UK00 162 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 RBM7Q9Y580 266 aaKnown RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 BSNQ9UPA5 3926 aa0.92□□□□□ -2.26
SKP1-203ENST00000517625 CHD2O14647 1828 aaKnown RBP0.92□□□□□ -2.26
SKP1-203ENST00000517625 CEP250Q9BV73 2442 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 TLN1Q9Y490 2541 aaKnown RBP0.91□□□□□ -2.26
SKP1-203ENST00000517625 CR1P17927 2039 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 BRCA2P51587 3418 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 TRAV38-1A0A0B4J264 116 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 OR51F1A6NGY5 319 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 LRRN3E7EW58 273 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 MRPS14O60783 128 aaKnown RBP0.91□□□□□ -2.26
SKP1-203ENST00000517625 PGLYRP1O75594 196 aaPredicted RBP0.91□□□□□ -2.26
SKP1-203ENST00000517625 CIAO1O76071 339 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 DEXIO95424 95 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 C1QAP02745 245 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 CCL5P13501 91 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 UCHL3P15374 230 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 RPL28P46779 137 aaKnown RBP0.91□□□□□ -2.26
SKP1-203ENST00000517625 HAAOP46952 286 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 MAGOHP61326 146 aaKnown RBP0.91□□□□□ -2.26
SKP1-203ENST00000517625 TPM4P67936 248 aa0.91□□□□□ -2.26
SKP1-203ENST00000517625 EMX1Q04741 257 aaPredicted RBP0.91□□□□□ -2.26
SKP1-203ENST00000517625 DMTNQ08495 405 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms