RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 IL3RAP26951 378 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 SPSB3Q6PJ21 355 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 PDPNQ86YL7 162 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 FLYWCH2Q96CP2 140 aaKnown RBP12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 RPS10P5Q9NQ39 176 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
THUMPD3-210ENST00000515662 RRHO14718 337 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 LIPFP07098 398 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 PRRX1P54821 245 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 SERF2P84101 59 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 CLEC7AQ9BXN2 247 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 TIMM9Q9Y5J7 89 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 DOCK11Q5JSL3 2073 aa12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
THUMPD3-210ENST00000515662 NDUFS7O75251 213 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 KBTBD11O94819 623 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 SNRNP70P08621 437 aaKnown RBP12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 TLE4Q04727 773 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 HABP2Q14520 560 aaPredicted RBP12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 GUK1Q16774 197 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 LFNGQ8NES3 379 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 TMEM170AQ8WVE7 144 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 RPRMQ9NS64 109 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.4
THUMPD3-210ENST00000515662 MDKP21741 143 aaPredicted RBP12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 CCL20P78556 96 aa12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 HLA-DRB5Q30154 266 aa12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 EIF5A2Q9GZV4 153 aaKnown RBP12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 ONECUT1Q9UBC0 465 aa12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
THUMPD3-210ENST00000515662 hCG_1809904A0A1W2PP81 198 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 A0A1W2PPE2 198 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 A0A1W2PR64 198 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 A0A1W2PRV1 198 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 FGF7P21781 194 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 BEND2Q8NDZ0 799 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 ENY2Q9NPA8 101 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 BTBD17A6NE02 478 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 PRSS46E5RG02 174 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 MC5RP33032 325 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 GPR6P46095 362 aaPredicted RBP12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 EFNA4P52798 201 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 PRCDQ00LT1 54 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 Q8N7P7 452 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 SFT2D1Q8WV19 159 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 HINT2Q9BX68 163 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
THUMPD3-210ENST00000515662 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 COX7A1P24310 79 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 LOC105371242A0A075B767 164 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 A0A1B0GW64 132 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 M0R036 132 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 OPN1MWP04001 364 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 HNF4GQ14541 408 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 HIST1H2BAQ96A08 127 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 PBDC1Q9BVG4 233 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 GGACTQ9BVM4 153 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 PLEKHA3Q9HB20 300 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 SMCO4Q9NRQ5 59 aa12.5□□□□□ -0.41
THUMPD3-210ENST00000515662 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 IGLV2-23P01705 113 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 OR13C7P0DN81 318 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 NPY1RP25929 384 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 CD1BP29016 333 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 ELLP55199 621 aaPredicted RBP12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 RAB11AP62491 216 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 PNKDQ8N490 385 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 OR5B3Q8NH48 314 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 OR4A5Q8NH83 315 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 RARRES2Q99969 163 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 NPCDR1Q9BY65 106 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 EIF3GO75821 320 aaKnown RBP eCLIP12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 CA2P00918 260 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 HBE1P02100 147 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 IFNA4P05014 189 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 ZNF726P1Q15940 193 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 VSTM2AQ8TAG5 236 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 TMEM167AQ8TBQ9 72 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 WDR83OSQ9Y284 106 aa12.49□□□□□ -0.41
THUMPD3-210ENST00000515662 USF1P22415 310 aaPredicted RBP12.48□□□□□ -0.41
THUMPD3-210ENST00000515662 ARF6P62330 175 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms