RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KLK9Q2XQG4 91 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 ZNF429Q86V71 674 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 LHFPL1Q86WI0 220 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 TMEM229BQ8NBD8 167 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 DMBX1Q8NFW5 382 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 DLX4Q92988 240 aaPredicted RBP9.85□□□□□ -0.83
CLCN3-210ENST00000515420 DIRAS2Q96HU8 199 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 SLIRPQ9GZT3 109 aaKnown RBP9.85□□□□□ -0.83
CLCN3-210ENST00000515420 HRASLSQ9HDD0 168 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 KLK9Q9UKQ9 250 aa9.85□□□□□ -0.83
CLCN3-210ENST00000515420 M0QYG6 137 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 UPK2O00526 184 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 DHFRP00374 187 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 CD3DP04234 171 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 CRYGCP07315 174 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 APELAP0DMC3 54 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 PTBP1P26599 531 aaKnown RBP eCLIP9.84□□□□□ -0.83
CLCN3-210ENST00000515420 SLURP1P55000 103 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 RND3P61587 244 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 RHOGP84095 191 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 ACSM6Q6P461 480 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 NECAP1Q8NC96 275 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 COMMD5Q9GZQ3 224 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 C6orf62Q9GZU0 229 aaPredicted RBP9.84□□□□□ -0.83
CLCN3-210ENST00000515420 NXF2Q9GZY0 626 aaKnown RBP9.84□□□□□ -0.83
CLCN3-210ENST00000515420 CEPT1Q9Y6K0 416 aa9.84□□□□□ -0.83
CLCN3-210ENST00000515420 A0A1B0GW64 132 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 DPPA5A6NC42 116 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 E7EUB6 86 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 K7EIL1 84 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 ZNF701M0R085 212 aaPredicted RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 HIST1H1BP16401 226 aaKnown RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 LPAR6P43657 344 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 OR2B8PP59922 312 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 ZNF45Q02386 682 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 IL18Q14116 193 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 MEF2DQ14814 521 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 ZNF585BQ52M93 769 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 RNASE12Q5GAN4 147 aaKnown RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 HSD17B13Q7Z5P4 300 aaPredicted RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 TERB2Q8NHR7 220 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 FYTTD1Q96QD9 318 aaKnown RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 TSC22D3Q99576 134 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 AKIP1Q9NQ31 210 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 PEF1Q9UBV8 284 aaKnown RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 RSL24D1Q9UHA3 163 aaKnown RBP9.83□□□□□ -0.84
CLCN3-210ENST00000515420 SORL1Q92673 2214 aa9.83□□□□□ -0.84
CLCN3-210ENST00000515420 HMX3A6NHT5 357 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 GSTZ1O43708 216 aaPredicted RBP9.82□□□□□ -0.84
CLCN3-210ENST00000515420 RBMXL2O75526 392 aaKnown RBP9.82□□□□□ -0.84
CLCN3-210ENST00000515420 RAB3DO95716 219 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 RPA2P15927 270 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 CTRB1P17538 263 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 PSMB6P28072 239 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 ECI1P42126 302 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 ATP5G2Q06055 141 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 PHLDA2Q53GA4 152 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 CTRB2Q6GPI1 263 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 STEAP1BQ6NZ63 245 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 TBC1D26Q86UD7 250 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 ZFAND1Q8TCF1 268 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 ELOVL1Q9BW60 279 aa9.82□□□□□ -0.84
CLCN3-210ENST00000515420 QTRT1Q9BXR0 403 aaKnown RBP9.82□□□□□ -0.84
CLCN3-210ENST00000515420 RBM38Q9H0Z9 239 aaKnown RBP9.82□□□□□ -0.84
CLCN3-210ENST00000515420 TRAV3A0A0B4J244 114 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 WI2-2373I1.2A0A1W2PRP0 233 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 CGB1A6NKQ9 187 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 SAP30O75446 220 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 B3GALNT1O75752 331 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 KRASP01116 189 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 PGAM2P15259 253 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 AREGP15514 252 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 EXOSC2Q13868 293 aaKnown RBP9.81□□□□□ -0.84
CLCN3-210ENST00000515420 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
CLCN3-210ENST00000515420 SURF2Q15527 256 aaPredicted RBP9.81□□□□□ -0.84
CLCN3-210ENST00000515420 OR4D10Q8NGI6 311 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 OR1L8Q8NGR8 309 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 OR5B3Q8NH48 314 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 MCFD2Q8NI22 146 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 SEC22AQ96IW7 307 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 SOSTQ9BQB4 213 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 FKBP11Q9NYL4 201 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 PRNDQ9UKY0 176 aa9.81□□□□□ -0.84
CLCN3-210ENST00000515420 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.8□□□□□ -0.84
CLCN3-210ENST00000515420 ANKRD34BA5PLL1 514 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 H0Y980 276 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 SNAPC5O75971 98 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 PRH1P02810 166 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 SERPINE2P07093 398 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 AKAIN1P0CW23 69 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 TNFSF8P32971 234 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 G6PCP35575 357 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 PIGPP57054 158 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 DEFA5Q01523 94 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 TATDN3Q17R31 274 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 C15orf32Q32M92 178 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 CCDC71LQ8N9Z2 235 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 OR6Q1Q8NGQ2 317 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms