RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 C12orf54Q6X4T0 127 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 WBP1Q96G27 269 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 TRAV24A0A0B4J272 114 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 SNAI2O43623 268 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 IGHV2-5P01817 119 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 BTF3P20290 206 aaKnown RBP6.54□□□□□ -1.36
CLCN3-209ENST00000513761 ACP1P24666 158 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 WIPF3A6NGB9 483 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 COX5BP10606 129 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 RBPJQ06330 500 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 DERL1Q9BUN8 251 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 CALYQ9NYX4 217 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 EREGO14944 169 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 CFHR1Q03591 330 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 MMDQ15546 238 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 UBALD2Q8IYN6 164 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 STXBP6Q8NFX7 210 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 OCC1Q8TAD7 63 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 NABP1Q96AH0 204 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 RASL11BQ9BPW5 248 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 LAMTOR2Q9Y2Q5 125 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 UFC1Q9Y3C8 167 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 RND2P52198 227 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 ZNF324BQ6AW86 544 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-209ENST00000513761 MIR17HGQ75NE6 70 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 BMPERQ8N8U9 685 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 ZNRF1Q8ND25 227 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 REG1AP05451 166 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 CRYGSP22914 178 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 S100A4P26447 101 aaKnown RBP6.54□□□□□ -1.36
CLCN3-209ENST00000513761 CCL8P80075 99 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 SPEM2Q0P670 501 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 FAM90A2PQ658T7 463 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 PCSK4Q6UW60 755 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 COL4A6Q14031 1691 aa6.54□□□□□ -1.36
CLCN3-209ENST00000513761 OR4C46A6NHA9 309 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 PRR19A6NJB7 356 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 ORM1P02763 201 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 SLC35E4Q6ICL7 350 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 OR13A1Q8NGR1 328 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 A0A0G2JRQ6 117 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 HYPMO75409 117 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 SCGB1C2P0DMR2 95 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 ZIC4Q8N9L1 334 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 SAP25Q8TEE9 199 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 ITLN1Q8WWA0 313 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 KCNS1Q96KK3 526 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 CLDN16Q9Y5I7 305 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 TRAV1-1A0A0B4J248 108 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 ZNF207O43670 478 aaKnown RBP6.53□□□□□ -1.36
CLCN3-209ENST00000513761 CLEC5AQ9NY25 188 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 NUDT3O95989 172 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 PTGDSP41222 190 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
CLCN3-209ENST00000513761 TIMD4Q96H15 378 aa6.53□□□□□ -1.36
CLCN3-209ENST00000513761 C1orf147Q96MC9 270 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-209ENST00000513761 TMEM116Q8NCL8 245 aa6.52□□□□□ -1.36
CLCN3-209ENST00000513761 NPIPB3Q92617 1050 aa6.52□□□□□ -1.36
CLCN3-209ENST00000513761 MRPL37Q9BZE1 423 aaKnown RBP6.52□□□□□ -1.36
CLCN3-209ENST00000513761 LIME1Q9H400 295 aa6.52□□□□□ -1.36
CLCN3-209ENST00000513761 A0A1B0GUS0 222 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM108Q6UXF1 575 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 FAM214BQ7L5A3 538 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM70Q9BUB7 260 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ZFP30Q9Y2G7 519 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 GNG7O60262 68 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 CELA3BP08861 270 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 SIGLEC12Q96PQ1 595 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF430Q9H8G1 570 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 TNFRSF19Q9NS68 423 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 HIGD1AQ9Y241 93 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 KLF2Q9Y5W3 355 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 F11RQ9Y624 299 aaKnown RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 LRRK1Q38SD2 2015 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ROS1P08922 2347 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 TANC1Q9C0D5 1861 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 B4E171 279 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 DLL1O00548 723 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 IGKV1-5P01602 117 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 TSPAN7P41732 249 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 C1orf194Q5T5A4 169 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 TEX38Q6PEX7 206 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 DNASE2BQ8WZ79 361 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 SSBP4Q9BWG4 385 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 SLC25A10Q9UBX3 287 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 JPT1Q9UK76 154 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 FNDC1Q4ZHG4 1894 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 RBFOX2O43251 390 aaKnown RBP eCLIP6.52□□□□□ -1.371e-9■■■■■ 33.1
CLCN3-209ENST00000513761 CA1P00915 261 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 HLA-DRB1P01911 266 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 FOXG1P55316 489 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 Q1RN00 199 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 PPP1R32Q7Z5V6 425 aa6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-209ENST00000513761 ANAPC1Q9H1A4 1944 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms