RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 TMEM56-RWDD3S4R434 201 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 IGHG4P01861 327 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 OPN1MWP04001 364 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 OPN1MW2P0DN77 364 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 OPN1MW3P0DN78 364 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 RPL27AP46776 148 aaKnown RBP16.47■□□□□ 0.23
NEIL3-202ENST00000513321 AKR1C2P52895 323 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 TMEM268Q5VZI3 342 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 COMMD1Q8N668 190 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 RBPMSQ93062 196 aaKnown RBP16.47■□□□□ 0.23
NEIL3-202ENST00000513321 TSC22D3Q99576 134 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 PHB2Q99623 299 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 SPIN2AQ99865 258 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 CITED2Q99967 270 aaPredicted RBP16.47■□□□□ 0.23
NEIL3-202ENST00000513321 SPIN2BQ9BPZ2 258 aa16.47■□□□□ 0.23
NEIL3-202ENST00000513321 A0A1W2PN81 502 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 E7EUB6 86 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 FGF2P09038 288 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 APELAP0DMC3 54 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 CHRNA7P36544 502 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 UBE2MP61081 183 aaKnown RBP16.46■□□□□ 0.23
NEIL3-202ENST00000513321 CD83Q01151 205 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 PPP1R1AQ13522 171 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 IZUMO4Q1ZYL8 232 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 RRNAD1Q96FB5 475 aaKnown RBP16.46■□□□□ 0.23
NEIL3-202ENST00000513321 COMMD5Q9GZQ3 224 aa16.46■□□□□ 0.23
NEIL3-202ENST00000513321 FOXA2Q9Y261 457 aaPredicted RBP16.46■□□□□ 0.23
NEIL3-202ENST00000513321 SFT2D2O95562 160 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 ANXA7P20073 488 aaKnown RBP16.45■□□□□ 0.22
NEIL3-202ENST00000513321 FOXE3Q13461 319 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 ASPHD1Q5U4P2 390 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 TMEM68Q96MH6 324 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 FYTTD1Q96QD9 318 aaKnown RBP16.45■□□□□ 0.22
NEIL3-202ENST00000513321 C20orf85Q9H1P6 137 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 TEX50A0A1B0GTY4 177 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 TCRBV4S1A1TA0A5B7 111 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 SOX15O60248 233 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 IGLV1-40P01703 118 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 P0C879 139 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 DEFA1P59665 94 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 DEFA3P59666 94 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 OR2B8PP59922 312 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 LGI3Q8N145 548 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 OR5T1Q8NG75 326 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 OR4A16Q8NH70 328 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 RNASE11Q8TAA1 199 aaKnown RBP16.45■□□□□ 0.22
NEIL3-202ENST00000513321 IL22RA2Q969J5 263 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 PRNDQ9UKY0 176 aa16.45■□□□□ 0.22
NEIL3-202ENST00000513321 TRAV6A0A075B6T7 132 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 A0A0G2JRQ6 117 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 A0A1B0GW64 132 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 HMX3A6NHT5 357 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 ELANEP08246 267 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 OR4E1P0C645 316 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 SRPXP78539 464 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 LCNL1Q6ZST4 164 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 CASTOR1Q8WTX7 329 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 KLK15Q9H2R5 256 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 NUDT15Q9NV35 164 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 FKBP11Q9NYL4 201 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 OR51B2Q9Y5P1 312 aa16.44■□□□□ 0.22
NEIL3-202ENST00000513321 C9orf170A2RU37 121 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 CGB1A6NKQ9 187 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 DBX1A6NMT0 343 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 C15orf61A6NNL5 157 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 TEX22C9J3V5 150 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 PF4V1P10720 104 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 PSMB8P28062 276 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 ANKRD55Q3KP44 614 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 CXorf66Q5JRM2 361 aaPredicted RBP16.43■□□□□ 0.22
NEIL3-202ENST00000513321 SLC35G3Q8N808 338 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 RNF152Q8N8N0 203 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 OR5M8Q8NGP6 311 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 ENKURQ8TC29 256 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 TMEM14BQ9NUH8 114 aa16.43■□□□□ 0.22
NEIL3-202ENST00000513321 A0A0B4J293 547 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 RBMXL2O75526 392 aaKnown RBP16.42■□□□□ 0.22
NEIL3-202ENST00000513321 RPLP1P05386 114 aaKnown RBP16.42■□□□□ 0.22
NEIL3-202ENST00000513321 H2AFB2P0C5Z0 115 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 C4orf46Q504U0 113 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 KHDC1LQ5JSQ8 128 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 TMEM65Q6PI78 240 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 LYZL2Q7Z4W2 148 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 NRARPQ7Z6K4 114 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 FAM219AQ8IW50 185 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 OR1L8Q8NGR8 309 aa16.42■□□□□ 0.22
NEIL3-202ENST00000513321 QTRT1Q9BXR0 403 aaKnown RBP16.42■□□□□ 0.22
NEIL3-202ENST00000513321 ALX4Q9H161 411 aaPredicted RBP16.42■□□□□ 0.22
NEIL3-202ENST00000513321 TSSC4Q9Y5U2 329 aaPredicted RBP16.42■□□□□ 0.22
NEIL3-202ENST00000513321 HLA-AP01891 365 aaKnown RBP16.41■□□□□ 0.22
NEIL3-202ENST00000513321 TRAPPC2P0DI81 140 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 TRAPPC2BP0DI82 140 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 RAB25P57735 213 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 DHRS2Q13268 280 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 Q6ZRM9 215 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 LYG2Q86SG7 212 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 LSM10Q969L4 123 aaKnown RBP16.41■□□□□ 0.22
NEIL3-202ENST00000513321 GPR146Q96CH1 333 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 HINT2Q9BX68 163 aa16.41■□□□□ 0.22
NEIL3-202ENST00000513321 ZNF355PQ9NSJ1 428 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms