RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
VEGFA-216ENST00000512683 ARPC4P59998 168 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 ZNF57Q68EA5 555 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-216ENST00000512683 ZNF66Q6ZN08 573 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 TSPAN14Q8NG11 270 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 OR13F1Q8NGS4 319 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 OR4A5Q8NH83 315 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 EEF1AKMT3Q96AZ1 226 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 SRSF8Q9BRL6 282 aaKnown RBP9.45□□□□□ -0.9
VEGFA-216ENST00000512683 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 HMX3A6NHT5 357 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 A8MWP6 167 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 TNFSF12O43508 249 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 KBTBD11O94819 623 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-216ENST00000512683 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-216ENST00000512683 ELLP55199 621 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-216ENST00000512683 TIMM50Q3ZCQ8 353 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 ZBTB34Q8NCN2 500 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 OR5AP2Q8NGF4 316 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 THYN1Q9P016 225 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 TP53TG1Q9Y2A0 90 aa9.44□□□□□ -0.9
VEGFA-216ENST00000512683 A0A087WXM4 84 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 LOC102724200A0A096LPH7 203 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-216ENST00000512683 UBE2CO00762 179 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 CYB5BO43169 146 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 NDUFB8O95169 186 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 C8orf88P0DMB2 117 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 CTRB1P17538 263 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 ARL3P36405 182 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 CBX5P45973 191 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 LSM3P62310 102 aaKnown RBP9.43□□□□□ -0.9
VEGFA-216ENST00000512683 UBE2NLQ5JXB2 153 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 CTRB2Q6GPI1 263 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 OR52B4Q8NGK2 314 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 GIMAP1Q8WWP7 306 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 S100A16Q96FQ6 103 aaKnown RBP9.43□□□□□ -0.9
VEGFA-216ENST00000512683 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 GGTLC1Q9BX51 225 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 SLC5A7Q9GZV3 580 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 BET1LQ9NYM9 111 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 MRPL27Q9P0M9 148 aaKnown RBP9.43□□□□□ -0.9
VEGFA-216ENST00000512683 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
VEGFA-216ENST00000512683 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 SULT1C2O00338 296 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 RBFOX2O43251 390 aaKnown RBP eCLIP9.42□□□□□ -0.9
VEGFA-216ENST00000512683 TNFAIP8O95379 198 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 MYOD1P15172 320 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 RPL8P62917 257 aaKnown RBP9.42□□□□□ -0.9
VEGFA-216ENST00000512683 DHRS11Q6UWP2 260 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 Q6ZWC4 215 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 SPAG16Q8N0X2 631 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 SAMD12Q8N8I0 201 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 UXS1Q8NBZ7 420 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 WDR89Q96FK6 387 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-216ENST00000512683 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 RETNQ9HD89 108 aa9.42□□□□□ -0.9
VEGFA-216ENST00000512683 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 TMEM213A2RRL7 107 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 CLEC3BP05452 202 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 DEFA4P12838 97 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 AREGP15514 252 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 HLA-GP17693 338 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 NAT1P18440 290 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 PTBP1P26599 531 aaKnown RBP eCLIP9.41□□□□□ -0.9
VEGFA-216ENST00000512683 GNRHRP30968 328 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 RFX2P48378 723 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 TAS2R20P59543 309 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 FXYD4P59646 89 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 POU2AF1Q16633 256 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 THOC7Q6I9Y2 204 aaKnown RBP9.41□□□□□ -0.9
VEGFA-216ENST00000512683 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
VEGFA-216ENST00000512683 HSD17B13Q7Z5P4 300 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-216ENST00000512683 SLC38A6Q8IZM9 456 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 TMEM61Q8N0U2 210 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 CD300LFQ8TDQ1 290 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 SLC25A46Q96AG3 418 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 FAM110AQ9BQ89 295 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 C5orf66Q9H5L9 145 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
VEGFA-216ENST00000512683 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 TRAV3A0A0B4J244 114 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 HLA-AP01891 365 aaKnown RBP9.4□□□□□ -0.9
VEGFA-216ENST00000512683 EIF4EP06730 217 aaKnown RBP9.4□□□□□ -0.9
VEGFA-216ENST00000512683 BMI1P35226 326 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 APOC4P55056 127 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 TAS2R31P59538 309 aa9.4□□□□□ -0.9
VEGFA-216ENST00000512683 NCS1P62166 190 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms