RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RBPMS2Q6ZRY4 209 aaKnown RBP8.55□□□□□ -1.04
RNF4-216ENST00000511859 OR2C3Q8N628 320 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 UXS1Q8NBZ7 420 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 CACNG8Q8WXS5 425 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 S100A16Q96FQ6 103 aaKnown RBP8.55□□□□□ -1.04
RNF4-216ENST00000511859 C11orf54Q9H0W9 315 aaPredicted RBP8.55□□□□□ -1.04
RNF4-216ENST00000511859 DIABLOQ9NR28 239 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 FBXL17Q9UF56 701 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 ZNF221Q9UK13 617 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 MRPS7Q9Y2R9 242 aaKnown RBP8.55□□□□□ -1.04
RNF4-216ENST00000511859 MEIS3P1A6NDR6 274 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 A8MWP6 167 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 MFNGO00587 321 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 MPPED1O15442 326 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 HLA-AP01891 365 aaKnown RBP8.54□□□□□ -1.04
RNF4-216ENST00000511859 APOA1P02647 267 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 FCER2P06734 321 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 CD3GP09693 182 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 CTRB1P17538 263 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 ZBTB25P24278 435 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 CEACAM6P40199 344 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 LINC00205P59089 165 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 ARFRP1Q13795 201 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 C15orf32Q32M92 178 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 RNASE12Q5GAN4 147 aaKnown RBP8.54□□□□□ -1.04
RNF4-216ENST00000511859 TMEM69Q5SWH9 247 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 CTRB2Q6GPI1 263 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 CNIH2Q6PI25 160 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 NUDCD2Q8WVJ2 157 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 MAFIPQ8WZ33 124 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 CMSS1Q9BQ75 279 aaKnown RBP8.54□□□□□ -1.04
RNF4-216ENST00000511859 SLC35D1Q9NTN3 355 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 EXTL2Q9UBQ6 330 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 HSF4Q9ULV5 492 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 SELENOKQ9Y6D0 94 aa8.54□□□□□ -1.04
RNF4-216ENST00000511859 ZNF320A2RRD8 509 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 TMEM213A2RRL7 107 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 IGLL5B9A064 214 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 C11orf94C9JXX5 98 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 PRH1P02810 166 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 TAS2R20P59543 309 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 MRPS15P82914 257 aaKnown RBP8.53□□□□□ -1.04
RNF4-216ENST00000511859 TAGLNQ01995 201 aaKnown RBP8.53□□□□□ -1.04
RNF4-216ENST00000511859 ZNF880Q6PDB4 577 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 SNX29P2Q8IUI4 249 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 TTC9CQ8N5M4 171 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 GALNT14Q96FL9 552 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 DIRAS2Q96HU8 199 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 HARBI1Q96MB7 349 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 RARRES2Q99969 163 aa8.53□□□□□ -1.04
RNF4-216ENST00000511859 NXF2Q9GZY0 626 aaKnown RBP8.53□□□□□ -1.04
RNF4-216ENST00000511859 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
RNF4-216ENST00000511859 HERC1Q15751 4861 aa8.52□□□□□ -1.04
RNF4-216ENST00000511859 SHOXO15266 292 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 SCGNO76038 276 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 SCTP09683 121 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 C8orf88P0DMB2 117 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 TNFSF8P32971 234 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 MFAP2P55001 183 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 GNG2P59768 71 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 CBX3Q13185 183 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 MRGPRG-AS1Q2M3A8 158 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 BTNL8Q6UX41 500 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 SLC25A42Q86VD7 318 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 TEX45Q8NA69 505 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.52□□□□□ -1.05
RNF4-216ENST00000511859 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
RNF4-216ENST00000511859 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
RNF4-216ENST00000511859 AUNIPQ9H7T9 357 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 MAP6D1Q9H9H5 199 aa8.52□□□□□ -1.05
RNF4-216ENST00000511859 MRPL27Q9P0M9 148 aaKnown RBP8.52□□□□□ -1.05
RNF4-216ENST00000511859 A0A0A6YYH2 397 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 A6NJ64 397 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 SRRM4A7MD48 611 aaKnown RBP8.51□□□□□ -1.05
RNF4-216ENST00000511859 RTL8CO15255 209 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 SSX5O60225 188 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 NAPSAO96009 420 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 TALDO1P37837 337 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 IL18Q14116 193 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 TNXAQ16473 311 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 HACD4Q5VWC8 232 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 MOB1BQ7L9L4 216 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 CMTM3Q96MX0 182 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 SPIN2AQ99865 258 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 SPIN2BQ9BPZ2 258 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 RIMS4Q9H426 269 aaPredicted RBP8.51□□□□□ -1.05
RNF4-216ENST00000511859 C5orf66Q9H5L9 145 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 C12orf4Q9NQ89 552 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 UBQLN2Q9UHD9 624 aa8.51□□□□□ -1.05
RNF4-216ENST00000511859 M0R1X1 148 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 OR2J3O76001 311 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 HLA-DQB1P01920 261 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 FCGR3AP08637 254 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
RNF4-216ENST00000511859 FCGR2BP31994 310 aaPredicted RBP8.5□□□□□ -1.05
RNF4-216ENST00000511859 S100A5P33763 92 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 ARL3P36405 182 aa8.5□□□□□ -1.05
RNF4-216ENST00000511859 PRSS8Q16651 343 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms