RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-216ENST00000511767 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-216ENST00000511767 HRASLSQ9HDD0 168 aa12.39□□□□□ -0.43
PDLIM5-216ENST00000511767 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-216ENST00000511767 PEF1Q9UBV8 284 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-216ENST00000511767 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
PDLIM5-216ENST00000511767 NPIPB5A8MRT5 1133 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 CD74P04233 296 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 IFNA6P05013 189 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 RPA2P15927 270 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 PSMB6P28072 239 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 ECI1P42126 302 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 OR2B8PP59922 312 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 DEFA5Q01523 94 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 ATP5G2Q06055 141 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 NECAP1Q8NC96 275 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 COMMD9Q9P000 198 aa12.38□□□□□ -0.43
PDLIM5-216ENST00000511767 DNAH9Q9NYC9 4486 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 TEX50A0A1B0GTY4 177 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 KRASP01116 189 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 FGF2P09038 288 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 AREGP15514 252 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 CTRB1P17538 263 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 TBPP20226 339 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 ZP3P21754 424 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 TNFSF8P32971 234 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 SSBP1Q04837 148 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 RNASE10Q5GAN6 216 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 CTRB2Q6GPI1 263 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 SLC38A6Q8IZM9 456 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 TERB2Q8NHR7 220 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
PDLIM5-216ENST00000511767 FAM223BA6NKX1 122 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 CTDSPLO15194 276 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 OR2J3O76001 311 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 TAS2R19P59542 299 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 MRPS10P82664 201 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 C19orf35Q6ZS72 473 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 FAM223AQ8IWN6 122 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 COMMD5Q9GZQ3 224 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-216ENST00000511767 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 DPPA5A6NC42 116 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 NDUFB8O95169 186 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 RAB3DO95716 219 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 IGKV1-39P01597 117 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 IGKV1D-39P04432 117 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.439e-7■■■■■ 30.4
PDLIM5-216ENST00000511767 S100GP29377 79 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 G6PCP35575 357 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 RND3P61587 244 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 STEAP1BQ6NZ63 245 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 FBXL7Q9UJT9 491 aa12.35□□□□□ -0.43
PDLIM5-216ENST00000511767 IGLC7A0M8Q6 106 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 SAP30O75446 220 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 ERVK-16P61578 105 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 C15orf32Q32M92 178 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 OR10W1Q8NGF6 305 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 ZNF486Q96H40 463 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 PRR25Q96S07 402 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 C6orf62Q9GZU0 229 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
PDLIM5-216ENST00000511767 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 NOL3O60936 208 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 REG1AP05451 166 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 TRAPPC2P0DI81 140 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 TRAPPC2BP0DI82 140 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 PI3P19957 117 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 IL18Q14116 193 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 OR1L8Q8NGR8 309 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 MCFD2Q8NI22 146 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 ZNF256Q9Y2P7 627 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-216ENST00000511767 IGLV11-55A0A075B6I3 123 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 FABP12A6NFH5 140 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 DBX1A6NMT0 343 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 BMPR1BO00238 502 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 SNAPC5O75971 98 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 DHFRP00374 187 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 PGAM2P15259 253 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms