RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 Q6ZT83 130 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR11H1Q8NG94 326 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR11H4Q8NGC9 324 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR11H2Q8NH07 326 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 NRTNQ99748 197 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 DLL3Q9NYJ7 618 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 UNC13CQ8NB66 2214 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 GAGE10A6NGK3 116 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 MOSP00540 346 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 CFHR1Q03591 330 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 ICAM4Q14773 271 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 SRSF7Q16629 238 aaKnown RBP eCLIP4.93□□□□□ -1.62
USP38-203ENST00000511739 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 FAM166AQ6J272 317 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR5AN1Q8NGI8 311 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 TXNDC17Q9BRA2 123 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 TNFSF18Q9UNG2 199 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 F11RQ9Y624 299 aaKnown RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 ATG2BQ96BY7 2078 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 H3BQ15 152 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 K7ERU9 68 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 COX6A1P12074 109 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 CRYBB2P43320 205 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 GLIPR1P48060 266 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 PLP1P60201 277 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 ERVK11-1P61568 191 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 MEF2CQ06413 473 aaPredicted RBP4.92□□□□□ -1.62
USP38-203ENST00000511739 H1FOOQ8IZA3 346 aaPredicted RBP4.92□□□□□ -1.62
USP38-203ENST00000511739 FGFRL1Q8N441 504 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 OR8D4Q8NGM9 314 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 CBLN4Q9NTU7 201 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 FOXA2Q9Y261 457 aaPredicted RBP4.92□□□□□ -1.62
USP38-203ENST00000511739 GGCTO75223 188 aaKnown RBP4.92□□□□□ -1.62
USP38-203ENST00000511739 IRF3Q14653 427 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 ISOC2Q96AB3 205 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 REPIN1Q9BWE0 567 aaKnown RBP4.92□□□□□ -1.62
USP38-203ENST00000511739 TMEM160Q9NX00 188 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 ARID1AO14497 2285 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 ANKRD36A6QL64 1941 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 HLA-DQA1P01909 254 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 LEPP41159 167 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 WDR82Q6UXN9 313 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 CST9LQ9H4G1 147 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 CRIM1Q9NZV1 1036 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 MARCH11A6NNE9 402 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 HMSDA8MTL9 139 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 F8WEM9 126 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 TCF19Q9Y242 345 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 DTX4Q9Y2E6 619 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 NGFRP08138 427 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 CD7P09564 240 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 ZNF146Q15072 292 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 S100A7L2Q5SY68 101 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 NCMAPQ5T1S8 102 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 CYB5R2Q6BCY4 276 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 SLC22A18ASQ8N1D0 253 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 ZNRF1Q8ND25 227 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 RNASEH2CQ8TDP1 164 aaKnown RBP4.92□□□□□ -1.62
USP38-203ENST00000511739 PRADC1Q9BSG0 188 aa4.92□□□□□ -1.62
USP38-203ENST00000511739 MYOFQ9NZM1 2061 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 IGHV3OR16-8A0A075B7F1 116 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 COX5BP10606 129 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 IL11P20809 199 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 CSRP1P21291 193 aaKnown RBP4.91□□□□□ -1.62
USP38-203ENST00000511739 LINC00305Q7Z4B0 112 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM181AQ8N9Y4 354 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 C19orf24Q9BVV8 132 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 MRPL32Q9BYC8 188 aaKnown RBP4.91□□□□□ -1.62
USP38-203ENST00000511739 AKAP6Q13023 2319 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A10PA6NDY2 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A18PA6NE21 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A16PA6NEW6 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A20PA6NIJ5 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A8PA6NJQ4 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A7PA6NKC0 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A22PA8MWA6 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A12PA8MX19 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A5PA8MXJ8 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A23PA8MXZ1 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A15PP0C7V4 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A13PP0C7W8 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A14PP0C7W9 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM90A24PP0C7X0 464 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 SRD5A1P18405 259 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 RPL32P62910 135 aaKnown RBP4.91□□□□□ -1.62
USP38-203ENST00000511739 TMEM136Q6ZRR5 245 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 VKORC1L1Q8N0U8 176 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TMEM86BQ8N661 226 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 KCNS1Q96KK3 526 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 RNF114Q9Y508 228 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TRAV20A0A0B4J274 112 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 TRAV21A0A0B4J279 112 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 SEC11BP0C7V7 166 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 CGB7P0DN87 165 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 BCL2P10415 239 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 RIPPLY2Q5TAB7 128 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 FAM219BQ5XKK7 198 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 GLMPQ8WWB7 406 aa4.91□□□□□ -1.62
USP38-203ENST00000511739 OR5AC2Q9NZP5 309 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms