RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 SPCS3P61009 180 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 BSXQ3C1V8 233 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 SPRNQ5BIV9 151 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 TGIF2LYQ8IUE0 185 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 ITLN1Q8WWA0 313 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 RAB1CQ92928 201 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 RAB24Q969Q5 203 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 RAB9BQ9NP90 201 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 GAB2Q9UQC2 676 aa13.21□□□□□ -0.3
SQSTM1-213ENST00000510187 PHOX2AO14813 284 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 VENTXO95231 258 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 CCL8P80075 99 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 ADIRFQ15847 76 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 MORN2Q502X0 79 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 TPRX1Q8N7U7 411 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 QTRT1Q9BXR0 403 aaKnown RBP13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 SRD5A3Q9H8P0 318 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 UBTD1Q9HAC8 227 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 OR6C3Q9NZP0 311 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 KIAA2026Q5HYC2 2103 aa13.2□□□□□ -0.3
SQSTM1-213ENST00000510187 IGKV1D-17A0A075B6S4 117 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 TFF1P04155 84 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 TRGC1P0CF51 173 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 COX6B1P14854 86 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 EGR1P18146 543 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 CDC34P49427 236 aaPredicted RBP13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 ERVK-16P61578 105 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 RPL23P62829 140 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 EDDM3AQ14507 147 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 SPNS3Q6ZMD2 512 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 HIST3H2BBQ8N257 126 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 OR10A7Q8NGE5 316 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 RFESDQ8TAC1 157 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 ANAPC16Q96DE5 110 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 PARLQ9H300 379 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 GNG12Q9UBI6 72 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 DMRT1Q9Y5R6 373 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 IGHV2-70P01814 119 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 SOD3P08294 240 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 OR9G9P0C7N8 305 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 HOXA4Q00056 320 aaPredicted RBP13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 C16orf82Q7Z2V1 217 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 MOGAT3Q86VF5 341 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 FRZBQ92765 325 aa13.19□□□□□ -0.3
SQSTM1-213ENST00000510187 H7BYZ3 331 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 FCGR3BO75015 233 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 TNFRSF1AP19438 455 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 CD1BP29016 333 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 GATA4P43694 442 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 RAB7AP51149 207 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 GCSAMQ8N6F7 178 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 Q8N7P7 452 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 OR4F5Q8NH21 305 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 OR5B12Q96R08 314 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 OR4F4Q96R69 305 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 SSX3Q99909 188 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 DCTN5Q9BTE1 182 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 SAP30LQ9HAJ7 183 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 GCM1Q9NP62 436 aa13.18□□□□□ -0.3
SQSTM1-213ENST00000510187 M0R1X1 148 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 PDE6DO43924 150 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 LOXL3P58215 753 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 PYY3Q5JQD4 70 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 KCNIP2Q9NS61 270 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 PITPNC1Q9UKF7 332 aa13.17□□□□□ -0.3
SQSTM1-213ENST00000510187 PROP1O75360 226 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 OPRK1P41145 380 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 VDAC2P45880 294 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 PPOXP50336 477 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 C11orf71Q6IPW1 123 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 DTX2Q86UW9 622 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 IFI27L2Q9H2X8 130 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 F6UZH7 168 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 PAGE4O60829 102 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 HRASP01112 189 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 SRP14P37108 136 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 GALR1P47211 349 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 OR4S2Q8NH73 311 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 S1PR3Q99500 378 aa13.16□□□□□ -0.3
SQSTM1-213ENST00000510187 CACNA1DQ01668 2161 aa13.15□□□□□ -0.3
SQSTM1-213ENST00000510187 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
SQSTM1-213ENST00000510187 LHBP01229 141 aa13.15□□□□□ -0.3
SQSTM1-213ENST00000510187 GYPAP02724 150 aa13.15□□□□□ -0.3
SQSTM1-213ENST00000510187 CD99P14209 185 aa13.15□□□□□ -0.3
SQSTM1-213ENST00000510187 LINC00205P59089 165 aa13.15□□□□□ -0.3
SQSTM1-213ENST00000510187 RELBQ01201 579 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms