RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 SLC25A15Q9Y619 301 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 SDK1Q7Z5N4 2213 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 EYSQ5T1H1 3165 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 IGLV3-9A0A075B6K5 115 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 AHRRA9YTQ3 701 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF134P52741 427 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 EDDM3BP56851 147 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 SLC24A4Q8NFF2 622 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 EAF1Q96JC9 268 aaPredicted RBP7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 GUCD1Q96NT3 240 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 ARRDC1-AS1Q9H2J1 176 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 HEYLQ9NQ87 328 aaPredicted RBP7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 CALYQ9NYX4 217 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 VCANP13611 3396 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 K7EN84 100 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 M0R1X1 148 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 CRYAAP02489 173 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 NPY1RP25929 384 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 ADMP35318 185 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 CST9LP1Q5W188 147 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 MIC13Q5XKP0 118 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 MRPL41Q8IXM3 137 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 C9orf106Q8NAJ2 232 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 SARAFQ96BY9 339 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 PATZ1Q9HBE1 687 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 TMEM106BQ9NUM4 274 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 V9GYV3 84 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 USF3Q68DE3 2245 aa7.59□□□□□ -1.19
PDGFRA-208ENST00000509490 MBD3L4A6NDZ8 208 aaPredicted RBP7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 MBD3L3A6NE82 208 aaPredicted RBP7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 MBD3L5A6NJ08 208 aaPredicted RBP7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 TM4SF5O14894 197 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 TNFSF13O75888 250 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 OR4A8P0C604 315 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 SP9P0CG40 484 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 C2orf83Q53S99 150 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 STPG3Q8N7X2 389 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 MBD3L2Q8NHZ7 208 aaPredicted RBP7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 IDI2-AS1Q9NZ38 188 aa7.59□□□□□ -1.2
PDGFRA-208ENST00000509490 IGHV3-43A0A0B4J1X8 118 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 KBTBD11-OT1A0A1B0GTJ5 212 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 A8MXE2 369 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 RBMXL2O75526 392 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 OR5G3P0C626 314 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 IGHV3-43DP0DP04 118 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 NDUFB7P17568 137 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 TPPP2P59282 170 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 RPL31P62899 125 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 PRCDQ00LT1 54 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 PRSS8Q16651 343 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 WDR73Q6P4I2 378 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 RASL11AQ6T310 242 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 OR1L8Q8NGR8 309 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 TRIB1Q96RU8 372 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 GNG12Q9UBI6 72 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 R4GN57 208 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 CRYABP02511 175 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 LINC00205P59089 165 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 RPL19P84098 196 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 OR10J3Q5JRS4 329 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 TPTE2P1Q5T6R2 138 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 OR4A47Q6IF82 309 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 RNF2Q99496 336 aa7.58□□□□□ -1.2
PDGFRA-208ENST00000509490 TRAV3A0A0B4J244 114 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 A0A1W2PRE2 83 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 M0R143 59 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 ISLRO14498 428 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 DEFA4P12838 97 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 SELLP14151 372 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 UBE2G2P60604 165 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 CX3CL1P78423 397 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 SPINK9Q5DT21 86 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 CT45A1Q5HYN5 189 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 VWA1Q6PCB0 445 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 FAM180AQ6UWF9 173 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 PQLC2Q6ZP29 291 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 C1orf229Q6ZS94 237 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 BHLHA15Q7RTS1 189 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 VASH2Q86V25 355 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 CXorf67Q86X51 503 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 TMEM256Q8N2U0 113 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 CT45A3Q8NHU0 189 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 RFESDQ8TAC1 157 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 WIPF2Q8TF74 440 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 MS4A10Q96PG2 267 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 DCTN5Q9BTE1 182 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 MRPL32Q9BYC8 188 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 BET1LQ9NYM9 111 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 DUSP13Q9UII6 198 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 TET2Q6N021 2002 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 TRAV17A0A0B4J275 112 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 UPK2O00526 184 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 NUPR1O60356 82 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 CEACAM4O75871 244 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 GLRXP35754 106 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 RPL39P5Q59GN2 51 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms