RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 GPHA2Q96T91 129 aa9.55□□□□□ -0.88
KDM3B-206ENST00000509468 SRSF8Q9BRL6 282 aaKnown RBP9.55□□□□□ -0.88
KDM3B-206ENST00000509468 COMMD5Q9GZQ3 224 aa9.55□□□□□ -0.88
KDM3B-206ENST00000509468 THYN1Q9P016 225 aa9.55□□□□□ -0.88
KDM3B-206ENST00000509468 CEPT1Q9Y6K0 416 aa9.55□□□□□ -0.88
KDM3B-206ENST00000509468 DNAH7Q8WXX0 4024 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 OR11H12B2RN74 326 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 UPK2O00526 184 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 HLA-AP01891 365 aaKnown RBP9.54□□□□□ -0.88
KDM3B-206ENST00000509468 FGF2P09038 288 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 PTHLHP12272 177 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 AREGP15514 252 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 NEDD8Q15843 81 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 POU2AF1Q16633 256 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 ANKRD55Q3KP44 614 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 TIMM50Q3ZCQ8 353 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 DHRS11Q6UWP2 260 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 RNF167Q9H6Y7 350 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 PLEKHA2Q9HB19 425 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 PLEKHA3Q9HB20 300 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 ZC4H2Q9NQZ6 224 aa9.54□□□□□ -0.88
KDM3B-206ENST00000509468 IGLV11-55A0A075B6I3 123 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 A0A1B0GW64 132 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 CLEC3BP05452 202 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 FXYD4P59646 89 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 OR2B8PP59922 312 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 HERV-K104P61576 105 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 KCTD21Q4G0X4 260 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
KDM3B-206ENST00000509468 THOC7Q6I9Y2 204 aaKnown RBP9.53□□□□□ -0.88
KDM3B-206ENST00000509468 SLC16A13Q7RTY0 426 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 IFT46Q9NQC8 304 aa9.53□□□□□ -0.88
KDM3B-206ENST00000509468 LCE6AA0A183 80 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 REG1AP05451 166 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 CD7P09564 240 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 ZNF818PQ6ZRF7 136 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 C19orf35Q6ZS72 473 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
KDM3B-206ENST00000509468 DEFB125Q8N687 156 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 UXS1Q8NBZ7 420 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 MARC2Q969Z3 335 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 HIPK2Q9H2X6 1198 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 S4R3C0 116 aa9.52□□□□□ -0.89
KDM3B-206ENST00000509468 RYR3Q15413 4870 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 RBMY1BA6NDE4 496 aaKnown RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 RBMY1EA6NEQ0 496 aaKnown RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 CGB1A6NKQ9 187 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 A8MWP6 167 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 FCER2P06734 321 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 RBMY1DP0C7P1 496 aaKnown RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 TRAPPC2P0DI81 140 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 TRAPPC2BP0DI82 140 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 MYOD1P15172 320 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 F2RP25116 425 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 PTBP1P26599 531 aaKnown RBP eCLIP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 GNRHRP30968 328 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 ELLP55199 621 aaPredicted RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 ERVK-16P61578 105 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 UBE2NLQ5JXB2 153 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 AADACL3Q5VUY0 350 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 PLET1Q6UQ28 207 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 CMTM1Q8IZ96 169 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 CADM3Q8N126 398 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 OR52B4Q8NGK2 314 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 OR51H1Q8NH63 302 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 VN1R17PQ8TDU5 208 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 WDR89Q96FK6 387 aaPredicted RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 QTRT1Q9BXR0 403 aaKnown RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 EHFQ9NZC4 300 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 COMMD9Q9P000 198 aa9.51□□□□□ -0.89
KDM3B-206ENST00000509468 MRPL27Q9P0M9 148 aaKnown RBP9.51□□□□□ -0.89
KDM3B-206ENST00000509468 TRAV3A0A0B4J244 114 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TEX50A0A1B0GTY4 177 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TMEM213A2RRL7 107 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 MEIS3P1A6NDR6 274 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 PGLYRP1O75594 196 aaPredicted RBP9.5□□□□□ -0.89
KDM3B-206ENST00000509468 SERPINE2P07093 398 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 PRSS3P35030 304 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
KDM3B-206ENST00000509468 RFX2P48378 723 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TAS2R46P59540 309 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TMEM69Q5SWH9 247 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 TSPAN14Q8NG11 270 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 OR1L8Q8NGR8 309 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 OR6F1Q8NGZ6 308 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 SRD5A3Q9H8P0 318 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 VCX3AQ9NNX9 186 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 UFC1Q9Y3C8 167 aa9.5□□□□□ -0.89
KDM3B-206ENST00000509468 SMIM31A0A1B0GVY4 71 aa9.49□□□□□ -0.89
KDM3B-206ENST00000509468 IGLC7A0M8Q6 106 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms