RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 C8orf4Q9NR00 106 aa1.5□□□□□ -2.17
COL4A3BP-205ENST00000508692 TRPM6Q9BX84 2022 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 TRAV38-1A0A0B4J264 116 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 EEF1E1-BLOC1S5C9J1V9 151 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 H7C2G1 150 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 I3L521 148 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 PSMD12O00232 456 aaPredicted RBP1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 LEPROTO15243 131 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 NSA2O95478 260 aaKnown RBP1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 SERPINA7P05543 415 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 SERPINA6P08185 405 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 ZNF705DP0CH99 300 aaPredicted RBP1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 FGF6P10767 208 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 RAB14P61106 215 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 ITGB3BPQ13352 177 aaPredicted RBP1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 TPRXLQ17RH7 258 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 ZNF791Q3KP31 576 aaPredicted RBP1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 RPP25LQ8N5L8 163 aaKnown RBP1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 ANKRD7Q92527 254 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 UBAP1Q9NZ09 502 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 STRCP1A6NGW2 1772 aa1.49□□□□□ -2.17
COL4A3BP-205ENST00000508692 NAV1Q8NEY1 1877 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 IGHV1-18A0A0C4DH31 117 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 HMSDA8MTL9 139 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 H3BT86 120 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 GPX1P07203 203 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 NFYAP23511 347 aaPredicted RBP1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 RPL28P46779 137 aaKnown RBP1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 IFITM2Q01629 132 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 KRTAP13-4Q3LI77 160 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 SYPL2Q5VXT5 272 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 LRRC28Q86X40 367 aaPredicted RBP1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 TRAPPC5Q8IUR0 188 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 C20orf196Q8IYI0 205 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 TMEM86AQ8N2M4 240 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 TMEM86BQ8N661 226 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 OR51D1Q8NGF3 324 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 CCDC42Q96M95 316 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 PARD6GQ9BYG4 376 aaPredicted RBP1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 CHST6Q9GZX3 395 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 VCX3BQ9H321 246 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 PAQR5Q9NXK6 330 aaPredicted RBP1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 VPS29Q9UBQ0 182 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 FUT9Q9Y231 359 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 DSCAMO60469 2012 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 ICE1Q9Y2F5 2266 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 COL5A3P25940 1745 aaPredicted RBP1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 PCNX2A6NKB5 2137 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 PLXNA3P51805 1871 aa1.48□□□□□ -2.17
COL4A3BP-205ENST00000508692 FLT4P35916 1363 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 DISP1Q96F81 1524 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 A0A1B0GVG6 124 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 IRGMA1A4Y4 181 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 ZNF860A6NHJ4 632 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 ZNF705FA8MVS1 300 aaPredicted RBP1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 F8W036 122 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 INMT-MINDY4F8WBC2 141 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 RPP14O95059 124 aaKnown RBP1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 NAPSAO96009 420 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 S100A6P06703 90 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 CCL5P13501 91 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 SLC38A11Q08AI6 406 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 NDUFA5Q16718 116 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 SPOPLQ6IQ16 392 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 ALKAL1Q6UXT8 129 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 Q6ZS49 121 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 LRRC25Q8N386 305 aaPredicted RBP1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 ACOT12Q8WYK0 555 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 PPP1R14BQ96C90 147 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 DCUN1D1Q96GG9 259 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 UCK1Q9HA47 277 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 EFCAB1Q9HAE3 211 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 PRTFDC1Q9NRG1 225 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 DOK5Q9P104 306 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 NAT8Q9UHE5 227 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 TIMM22Q9Y584 194 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 V9GYY5 206 aaPredicted RBP1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 ATG2BQ96BY7 2078 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 BAHCC1Q9P281 2608 aa1.47□□□□□ -2.17
COL4A3BP-205ENST00000508692 TRBV20OR9-2A0A075B6H5 130 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 A0A0J9YY10 115 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 A0A1B0GX78 115 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 IGHV3-7P01780 117 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 TFPTP0C1Z6 253 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 SULT1A3P0DMM9 295 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 SULT1A4P0DMN0 295 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 CCL20P78556 96 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 RPL18Q07020 188 aaKnown RBP1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 IBA57Q5T440 356 aaKnown RBP1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 MRPL30Q8TCC3 161 aaKnown RBP1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 COMMD5Q9GZQ3 224 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 WDR61Q9GZS3 305 aaKnown RBP1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 IL36BQ9NZH7 164 aa1.46□□□□□ -2.18
COL4A3BP-205ENST00000508692 PQLC2LA1A4F0 135 aa1.45□□□□□ -2.18
COL4A3BP-205ENST00000508692 GGT3PA6NGU5 568 aa1.45□□□□□ -2.18
COL4A3BP-205ENST00000508692 CLDN24A6NM45 220 aa1.45□□□□□ -2.18
COL4A3BP-205ENST00000508692 SLC22A1O15245 554 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms