RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLC25A15Q9Y619 301 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TECTAO75443 2155 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TRAV30A0A087WSZ9 112 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TRAV25A0A0B4J276 109 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 H0YL77 283 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 CCSO14618 274 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OIP5O43482 229 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV4-31P0DP07 118 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 GPX2P18283 190 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 PI3P19957 117 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 CDKN2AP42771 156 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF154Q13106 437 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 KLRD1Q13241 179 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 FAM219BQ5XKK7 198 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TMUB2Q71RG4 321 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR13C6PQ8NH95 151 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 NUDCD2Q8WVJ2 157 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 RBPMSQ93062 196 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 AJUBAQ96IF1 538 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 HS3ST6Q96QI5 342 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 BCL2L10Q9HD36 194 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 IDI2-AS1Q9NZ38 188 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 MALRD1Q5VYJ5 2156 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TRGV4A0A0C4DH28 118 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 NPFFO15130 113 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 CST7O76096 145 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR2C1O95371 312 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 PTTG1O95997 202 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 SEC11BP0C7V7 166 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF688P0C7X2 276 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM97Q5BJF2 176 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 SPINK9Q5DT21 86 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 GGNQ86UU5 652 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 GBGT1Q8N5D6 347 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZIC4Q8N9L1 334 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR52I1Q8NGK6 324 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR10R2Q8NGX6 335 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR9G1Q8NH87 305 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OTOSQ8NHW6 89 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 DTD1Q8TEA8 209 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TEX37Q96LM6 180 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 CITED1Q99966 193 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 FAAP24Q9BTP7 215 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TEX50A0A1B0GTY4 177 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ADAM10O14672 748 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 DEDDO75618 318 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM50AO95807 157 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 RD3LP0DJH9 198 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZFP36P26651 326 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 HRH1P35367 487 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CDX1P47902 265 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 GNG4P50150 75 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SRSF9Q13242 221 aaKnown RBP eCLIP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZAR1Q86SH2 424 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 PPP1R27Q86WC6 154 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 COPS9Q8WXC6 57 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 RAB40CQ96S21 281 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SMIM7Q9BQ49 75 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM70Q9BUB7 260 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 PAXXQ9BUH6 204 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C20orf27Q9GZN8 174 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 NAA60Q9H7X0 242 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM167BQ9NRX6 74 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 OR4C46A6NHA9 309 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 DHRS7CA6NNS2 312 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 K7ERU9 68 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 HYPMO75409 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CFDP00746 253 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 LIMS3P0CW19 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 LIMS4P0CW20 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 HIST1H1BP16401 226 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 NPBWR2P48146 333 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 RIGQ13278 110 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 FXYD3Q14802 87 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 MEIG1Q5JSS6 88 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 FAM74A4Q5TZK3 123 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ASCL4Q6XD76 172 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM123Q8N131 208 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 PARP16Q8N5Y8 322 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 GALNT14Q96FL9 552 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ARHGAP5-AS1Q96IT6 56 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 NRN1Q9NPD7 142 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C20orf141Q9NUB4 165 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF586Q9NXT0 402 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TECRQ9NZ01 308 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 HIGD1AQ9Y241 93 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TNFRSF18Q9Y5U5 241 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3-35A0A0C4DH35 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGSF23A1L1A6 192 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 NPIPB11E5RHQ5 1161 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 H7C1H1 209 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF561-AS1K7EIQ3 104 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 K7EP13 123 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 WNT2P09544 360 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 FOLR2P14207 255 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 LMO1P25800 156 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 RAB5CP51148 216 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 EFNB2P52799 333 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 MPV17LQ2QL34 196 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms